RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 ZBTB25P24278 435 aa15.33■□□□□ 0.04
CACNA1A-253ENST00000637927 Q3ZCU0 254 aa15.33■□□□□ 0.04
CACNA1A-253ENST00000637927 PYCR3Q53H96 274 aa15.33■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF583Q96ND8 569 aa15.33■□□□□ 0.04
CACNA1A-253ENST00000637927 RAB22AQ9UL26 194 aa15.33■□□□□ 0.04
CACNA1A-253ENST00000637927 PSG11Q9UQ72 335 aa15.33■□□□□ 0.04
CACNA1A-253ENST00000637927 KDM3BQ7LBC6 1761 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF324O75467 553 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ARR3P36575 388 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 LIMK1P53667 647 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 PDZK1IP1Q13113 114 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 Q499Y3 187 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 LHFPL2Q6ZUX7 228 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TCFL5Q9UL49 500 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 IDSB3KWA1 339 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 M0R135 149 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 DFFBO76075 338 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 SOD1P00441 154 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF121P58317 390 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 CDH26Q8IXH8 852 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ZFAND2BQ8WV99 257 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 LHX4Q969G2 390 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF799Q96GE5 643 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 GPX7Q96SL4 187 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 SMIM7Q9BQ49 75 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TMEM204Q9BSN7 226 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 SRD5A3Q9H8P0 318 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 F2RL2O00254 374 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 PAPLNO95428 1278 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 HTR1DP28221 377 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 RPL27P61353 136 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 OR1C1Q15619 314 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TMEM52BQ4KMG9 183 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 BET1LQ9NYM9 111 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 SLC22A13Q9Y226 551 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 EIF1P41567 113 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF620Q6ZNG0 422 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TMED6Q8WW62 240 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TECRQ9NZ01 308 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 MMP24Q9Y5R2 645 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 MN1Q10571 1320 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 LOC107986453A0A1B0GWG9 222 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TEAD1P28347 426 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 CNN1P51911 297 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ADIPOQQ15848 244 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 FFAR4Q5NUL3 377 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF561Q8N587 486 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 TOX2Q96NM4 488 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 LAMP3Q9UQV4 416 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 ECM29Q5VYK3 1845 aa15.32■□□□□ 0.04
CACNA1A-253ENST00000637927 SBK3P0C264 359 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 PATE4P0C8F1 98 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 PLK5Q496M5 336 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 OR2T2Q6IF00 324 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 OR8A1Q8NGG7 326 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 SLC35B4Q969S0 331 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 PHF7Q9BWX1 381 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 HS3ST3A1Q9Y663 406 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 A0A1W2PR48 441 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 M0R3E3 92 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 Q6ZS52 159 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 MYPOPQ86VE0 399 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 TMEM99Q8N816 258 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 OR4F17Q8NGA8 305 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 FGF14Q92915 247 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 REPIN1Q9BWE0 567 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 TIMM10BQ9Y5J6 103 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 GGTLC2Q14390 218 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 DGAT2L6Q6ZPD8 337 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 ADGRG7Q96K78 797 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 GNRHR2Q96P88 292 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF815PA8K554 130 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 MAVSQ7Z434 540 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 MRGPRX1Q96LB2 322 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 OR4C12Q96R67 309 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 TAAR6Q96RI8 345 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 FGF17O60258 216 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 RFX2P48378 723 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 METRNLQ641Q3 311 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 ST3GAL6Q9Y274 331 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 KLF13Q9Y2Y9 288 aaPredicted RBP15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 SCG5P05408 212 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 RPL24P83731 157 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 TIAL1Q01085 375 aaKnown RBP eCLIP15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 PRSS8Q16651 343 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 OR6K3Q8NGY3 331 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 CSF3RQ99062 836 aa15.31■□□□□ 0.04
CACNA1A-253ENST00000637927 GCGP01275 180 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 NEURL3Q96EH8 262 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 ZNF586Q9NXT0 402 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 FAHP16930 419 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 TMEM81Q6P7N7 255 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 MYEOVQ96EZ4 313 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 DDOQ99489 341 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 SIRT3Q9NTG7 399 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 MMP11P24347 488 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 REG1BP48304 166 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 CD81P60033 236 aa15.3■□□□□ 0.04
CACNA1A-253ENST00000637927 MRPS10P82664 201 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms