RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FGFBP3Q8TAT2 258 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 HAS2Q92819 552 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 C10orf35Q96D05 121 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 ARHGAP5-AS1Q96IT6 56 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 FER1L6-AS2Q96M78 137 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 IP6K3Q96PC2 410 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 GPR173Q9NS66 373 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 U3KQ87 197 aa11.9□□□□□ -0.51
NEK3-205ENST00000610828 CACNA1HO95180 2353 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 OR6C6A6NF89 314 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 LIPCP11150 499 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 ZNF35P13682 527 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 PCBD1P61457 104 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 Q6ZSR3 168 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 CCDC54Q8NEL0 328 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 CYYR1Q96J86 154 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 SLC2A8Q9NY64 477 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 GHRLQ9UBU3 117 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 OPN4Q9UHM6 478 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 SLC22A5O76082 557 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 ALX3O95076 343 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 FARS2O95363 451 aaKnown RBP11.89□□□□□ -0.51
NEK3-205ENST00000610828 PMP2P02689 132 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 IFNA6P05013 189 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 MGMTP16455 207 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
NEK3-205ENST00000610828 RPS27AP62979 156 aaKnown RBP11.89□□□□□ -0.51
NEK3-205ENST00000610828 TMEM45BQ96B21 275 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 RADILQ96JH8 1075 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
NEK3-205ENST00000610828 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 CLEC4MQ9H2X3 399 aaPredicted RBP11.89□□□□□ -0.51
NEK3-205ENST00000610828 HEXA-AS1Q9H8Q6 139 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
NEK3-205ENST00000610828 ZNF407Q9C0G0 2248 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 F5H5P2 479 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 RAD51DO75771 328 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 SYNGR4O95473 234 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 NAT2P11245 290 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 ZNF708P17019 499 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 ALDH3B1P43353 468 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 RIPPLY1Q0D2K3 151 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 DCAF12L2Q5VW00 463 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 C12orf45Q8N5I9 185 aaPredicted RBP11.88□□□□□ -0.51
NEK3-205ENST00000610828 OR4K15Q8NH41 348 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 FNDC9Q8TBE3 224 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 FAM117AQ9C073 453 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 CALHM2Q9HA72 323 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 DNAJC13O75165 2243 aa11.88□□□□□ -0.51
NEK3-205ENST00000610828 IGKV3D-15A0A087WSY6 115 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 H3BUI4 141 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 HLA-AP01891 365 aaKnown RBP11.87□□□□□ -0.51
NEK3-205ENST00000610828 SP1P08047 785 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 MEOX1P50221 254 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 MTCP1P56278 107 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 DHRS2Q13268 280 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 ARFRP1Q13795 201 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 TGIF1Q15583 401 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 GRK1Q15835 563 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 ZNF680Q8NEM1 530 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 ELMOD3Q96FG2 381 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 ARPC5LQ9BPX5 153 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 PRRG4Q9BZD6 226 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 SLC7A10Q9NS82 523 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 MCTS1Q9ULC4 181 aaKnown RBP11.87□□□□□ -0.51
NEK3-205ENST00000610828 LOC400499M0QZD8 3231 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 DHRS7CA6NNS2 312 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 MFNGO00587 321 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 TBPP20226 339 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 BLVRBP30043 206 aaPredicted RBP11.87□□□□□ -0.51
NEK3-205ENST00000610828 ZMYND11Q15326 602 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 FAM89BQ8N5H3 189 aa11.87□□□□□ -0.51
NEK3-205ENST00000610828 KLF13Q9Y2Y9 288 aaPredicted RBP11.87□□□□□ -0.51
NEK3-205ENST00000610828 FAM230AA0A1W2PPH8 454 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 PLSCR5A0PG75 271 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 ARGFXA6NJG6 315 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 OR2AT4A6NND4 320 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 KLRC4-KLRK1H3BQV0 150 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
NEK3-205ENST00000610828 MPC2O95563 127 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 ZNF24P17028 368 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 NFYAP23511 347 aaPredicted RBP11.86□□□□□ -0.51
NEK3-205ENST00000610828 MPZP25189 248 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 PPIAP62937 165 aaKnown RBP11.86□□□□□ -0.51
NEK3-205ENST00000610828 C3AR1Q16581 482 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 PNLIPRP3Q17RR3 467 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 PABPC1L2AQ5JQF8 200 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 OR8H3Q8N146 312 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 STEAP2Q8NFT2 490 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
NEK3-205ENST00000610828 PARPBPQ9NWS1 579 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 FREM1Q5H8C1 2179 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 A0A096LPE4 126 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 A0A1W2PPZ6 126 aa11.86□□□□□ -0.51
NEK3-205ENST00000610828 L7N2F9 121 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms