RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PGAM5Q96HS1 289 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 RAB3IPQ96QF0 476 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 ABHD6Q9BV23 337 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 MUC13Q9H3R2 512 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 NIPAL2Q9H841 368 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 SF3B6Q9Y3B4 125 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 RNASEK-C17orf49H0YIS7 233 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 ACOT8O14734 319 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 GLCEO94923 617 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 H2BFMP0C1H6 154 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 PAICSP22234 425 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 MSX2P35548 267 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 OPRL1P41146 370 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 ZNF121P58317 390 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 AANATQ16613 207 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 LYPD4Q6UWN0 246 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 ZNF788Q6ZQV5 615 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 FAM57BQ71RH2 274 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 WDR86Q86TI4 376 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 REEP1Q9H902 201 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 RAB18Q9NP72 206 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 RHBDD3Q9Y3P4 386 aa14.62□□□□□ -0.07
SHKBP1-227ENST00000602011 ZNF816-ZNF321PA0A0X1KG74 233 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 ANKRD61A6NGH8 418 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 GYPBP06028 91 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 ACAA1P09110 424 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 PSKH1P11801 424 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 CSNK2BP67870 215 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 IKZF1Q13422 519 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 KRT74Q7RTS7 529 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 ERI1Q8IV48 349 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 PDZD9Q8IXQ8 264 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 TIGD4Q8IY51 512 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 FAM216BQ8N7L0 139 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 BEND2Q8NDZ0 799 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 OR6N2Q8NGY6 317 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 OR4Q3Q8NH05 313 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 OR5P3Q8WZ94 311 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 TNFRSF14Q92956 283 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 SIRT7Q9NRC8 400 aa14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 SLC25A10Q9UBX3 287 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-227ENST00000602011 TRBV23-1A0A0A0MS06 115 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 A0A1W2PPH5 198 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 MEIOCA2RUB1 952 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 ACOD1A6NK06 481 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 SIGLEC5O15389 551 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 TSPAN15O95858 294 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 CSF1P09603 554 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 ANOS1P23352 680 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 FAM98BQ52LJ0 330 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 OR2T5Q6IEZ7 315 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 DEFB107AQ8IZN7 70 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 Q8N7P7 452 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 OR2T29Q8NH02 315 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 ANGPTL6Q8NI99 470 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 ZNF671Q8TAW3 534 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 TEX47Q8TBZ9 253 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 H1FXQ92522 213 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 RNF170Q96K19 258 aa14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 SAMHD1Q9Y3Z3 626 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-227ENST00000602011 DCTN3O75935 186 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 LYNP07948 512 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 CLUP10909 449 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 ATP6V1B1P15313 513 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 HOXB6P17509 224 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 AMY2BP19961 511 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 POU1F1P28069 291 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 KIR2DS4P43632 304 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 MXRA7P84157 204 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 PRDX4Q13162 271 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 KLHL12Q53G59 568 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 Q6ZTK2 550 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 OTOSQ8NHW6 89 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 MEGF9Q9H1U4 602 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 FAM53CQ9NYF3 392 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 RASL12Q9NYN1 266 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 NLKQ9UBE8 527 aa14.59□□□□□ -0.07
SHKBP1-227ENST00000602011 hCG_1809904A0A1W2PP81 198 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 A0A1W2PPE2 198 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 A0A1W2PQ09 198 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 A0A1W2PR64 198 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 A0A1W2PRV1 198 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 ZNF850A8MQ14 1090 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 HMGN1P05114 100 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 GABRA5P31644 462 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 SAA4P35542 130 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 MAP2K3P46734 347 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 HERPUD1Q15011 391 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 SLC35E4Q6ICL7 350 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 DEGS2Q6QHC5 323 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 LIAT1Q6ZQX7 453 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 KCTD8Q6ZWB6 473 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 ZDHHC23Q8IYP9 409 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 OR5T2Q8NGG2 359 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 PIGCQ92535 297 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 RANBP3Q9H6Z4 567 aaPredicted RBP14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 ARMC1Q9NVT9 282 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 DNAJC27Q9NZQ0 273 aa14.58□□□□□ -0.08
SHKBP1-227ENST00000602011 ZNF319Q9P2F9 582 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms