RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NEIL1Q96FI4 390 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 PRDM13Q9H4Q3 707 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 FAM118AQ9NWS6 357 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 COPS3Q9UNS2 423 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 MMP24Q9Y5R2 645 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 KIR2DS1A0A191URI9 304 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 C5orf63A6NC05 138 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 ANKRD65E5RJM6 399 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 F5H5P2 479 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 H0YL77 283 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 SLC16A6O15403 523 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 MLNRO43193 412 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 ENTPD6O75354 484 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 CYB5R3P00387 301 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 KRT8P05787 483 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 CA6P23280 308 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 PRSS12P56730 875 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 FAM3AP98173 230 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 GFOD2Q3B7J2 385 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 C16orf87Q6PH81 154 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 C1orf87Q8N0U7 546 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 OR56B2PQ8NGI1 322 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 UBE2FQ969M7 185 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 MYCBPQ99417 103 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 APOL4Q9BPW4 351 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 TMEM246Q9BRR3 403 aa14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 SOX21Q9Y651 276 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-203ENST00000594298 IGHV3OR16-10A0A075B7F0 116 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 TRAV40A0A0B4J280 105 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 A0A0U1RQV5 110 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 PSMD9O00233 223 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 ZNF205O95201 554 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 HLA-DPB1P04440 258 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 IRF2P14316 349 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 GNALP38405 381 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 CD200P41217 278 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 GATA4P43694 442 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 GSK3AP49840 483 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 PDLIM3Q53GG5 364 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 NLRC3Q7RTR2 1065 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 GALNT4Q8N4A0 578 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 PLPP7Q8NBV4 271 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 OR10H4Q8NGA5 316 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 OR8B3Q8NGG8 313 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 OR11L1Q8NGX0 322 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 TMIGD2Q96BF3 282 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 OR8B2Q96RD0 313 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 ADAT1Q9BUB4 502 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 DCLRE1BQ9H816 532 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 MOB1AQ9H8S9 216 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 C14orf119Q9NWQ9 140 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 TRRAPQ9Y4A5 3859 aa14.61□□□□□ -0.07
SHKBP1-203ENST00000594298 hCG_38984A0A1B0GV85 526 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 SULT1C4O75897 302 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 ATP6V1B1P15313 513 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 MDKP21741 143 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 BPIFB3P59826 476 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 ACTC1P68032 377 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 ACTA1P68133 377 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 LRRC36Q1X8D7 754 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 TTC23Q5W5X9 447 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 PLEKHG7Q6ZR37 379 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 MOGAT3Q86VF5 341 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 YIPF7Q8N8F6 280 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 OR8B12Q8NGG6 310 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 OR8S1Q8NH09 359 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 RHOXF1Q8NHV9 184 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 RNFT2Q96EX2 444 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 MRPL48Q96GC5 212 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 TBX5Q99593 518 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 TTTY10Q9BZA0 68 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 PBOV1Q9GZY1 135 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 ABCB9Q9NP78 766 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 FAM206AQ9NX38 181 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 ZNF319Q9P2F9 582 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 R4GMQ9 66 aa14.6□□□□□ -0.07
SHKBP1-203ENST00000594298 A0A1B0GUS0 222 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 METTL15A6NJ78 407 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 LOC110117498-PIK3R3F6TDL0 507 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 ANOS1P23352 680 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 PMELP40967 661 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 MAP2K3P46734 347 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 PITPNBP48739 271 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 DEFA6Q01524 100 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 MAB21L1Q13394 359 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 OR8B8Q15620 311 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 LPCAT4Q643R3 524 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 DCDC5Q6ZRR9 648 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 ENTHD1Q8IYW4 607 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 Q8TCH9 128 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 TAF15Q92804 592 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 NUDT16L1Q9BRJ7 211 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 VCXQ9H320 206 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 FN3KRPQ9HA64 309 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 CLN8Q9UBY8 286 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 NUFIP1Q9UHK0 495 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 MRM2Q9UI43 246 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 MPC1Q9Y5U8 109 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 SNX5Q9Y5X3 404 aa14.59□□□□□ -0.07
SHKBP1-203ENST00000594298 PKD1L1Q8TDX9 2849 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms