RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 RAB40AQ8WXH6 277 aa17.88■□□□□ 0.45
PNKP-203ENST00000593946 CCDC120Q96HB5 630 aa17.88■□□□□ 0.45
PNKP-203ENST00000593946 OR2J1Q9GZK6 312 aa17.88■□□□□ 0.45
PNKP-203ENST00000593946 KCNK15Q9H427 330 aa17.88■□□□□ 0.45
PNKP-203ENST00000593946 RHBDL2Q9NX52 303 aa17.88■□□□□ 0.45
PNKP-203ENST00000593946 EPG5Q9HCE0 2579 aa17.88■□□□□ 0.45
PNKP-203ENST00000593946 TMEM272A0A1B0GTI8 110 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 M0R1B8 84 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 LDLRAD4O15165 306 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 CST4P01036 141 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 PRKACBP22694 351 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 RAD52P43351 418 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 ART1P52961 327 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 MADCAM1Q13477 382 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 FTMTQ8N4E7 242 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 SLC25A40Q8TBP6 338 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 PIGCQ92535 297 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 CRIM1Q9NZV1 1036 aa17.87■□□□□ 0.45
PNKP-203ENST00000593946 BPNT1O95861 308 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 TUBG1P23258 451 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 IFITM3Q01628 133 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 IL18Q14116 193 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 FBXL19-AS1Q494R0 122 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 SSX8Q7RTT4 187 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 SNX29P2Q8IUI4 249 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 HAVCR1Q96D42 359 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 GPER1Q99527 375 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 CCDC32Q9BV29 185 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 PAPOLGQ9BWT3 736 aaKnown RBP17.86■□□□□ 0.45
PNKP-203ENST00000593946 BCL2L14Q9BZR8 327 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 NEK6Q9HC98 313 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 TUBG2Q9NRH3 451 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 COQ3Q9NZJ6 369 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 ZNF850A8MQ14 1090 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 UPK1BO75841 260 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 RAC2P15153 192 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 RANBP1P43487 201 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 OR3A4PP47883 348 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 PLCXD3Q63HM9 321 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 AWAT2Q6E213 333 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 ALKBH2Q6NS38 261 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 ANGPTL5Q86XS5 388 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 C1orf174Q8IYL3 243 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 GDPD1Q8N9F7 314 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 PNLDC1Q8NA58 520 aaKnown RBP17.86■□□□□ 0.45
PNKP-203ENST00000593946 CMBLQ96DG6 245 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 MARS2Q96GW9 593 aaKnown RBP17.86■□□□□ 0.45
PNKP-203ENST00000593946 GPR160Q9UJ42 338 aa17.86■□□□□ 0.45
PNKP-203ENST00000593946 MRPS28Q9Y2Q9 187 aaKnown RBP17.86■□□□□ 0.45
PNKP-203ENST00000593946 A0A0G2JMP0 313 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 A0A0X1KG70 313 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 PITPNBP48739 271 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 EFNB2P52799 333 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 QRFPP83859 136 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 OR2T2Q6IF00 324 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 LHFPL2Q6ZUX7 228 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 MOB3CQ70IA8 216 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 OR4M2Q8NGB6 313 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 PTX4Q96A99 478 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 CPNE2Q96FN4 548 aaPredicted RBP17.85■□□□□ 0.45
PNKP-203ENST00000593946 C1orf147Q96MC9 270 aaPredicted RBP17.85■□□□□ 0.45
PNKP-203ENST00000593946 FBLN5Q9UBX5 448 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 PLCE1Q9P212 2302 aa17.85■□□□□ 0.45
PNKP-203ENST00000593946 IGKV1-27A0A075B6S5 117 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 A0A1B0GUH1 482 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 LILRA1O75019 489 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 PTGFRP43088 359 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 ALDH3B1P43353 468 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 NR4A2P43354 598 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 RBP2P50120 134 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 FUT6P51993 359 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 PRDX4Q13162 271 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 PYDC2Q56P42 97 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 DTX3Q8N9I9 347 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 GALNT11Q8NCW6 608 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 BHLHE23Q8NDY6 225 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 LILRB4Q8NHJ6 448 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 KLF14Q8TD94 323 aaPredicted RBP17.84■□□□□ 0.45
PNKP-203ENST00000593946 RFT1Q96AA3 541 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 S100A16Q96FQ6 103 aaKnown RBP17.84■□□□□ 0.45
PNKP-203ENST00000593946 SLC7A11Q9UPY5 501 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 ZFYVE26Q68DK2 2539 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 CRYAAP02489 173 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 THBDP07204 575 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 VSIG8P0DPA2 414 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 NAT2P11245 290 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 PPP3CBP16298 524 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 MTCP1P56278 107 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 ZNF181Q2M3W8 571 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 GLIPR1L1Q6UWM5 242 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 BAIAP2L2Q6UXY1 529 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 BIVMQ86UB2 503 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 ZDHHC23Q8IYP9 409 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 BORCS8Q96FH0 119 aa17.84■□□□□ 0.45
PNKP-203ENST00000593946 FAM230AA0A1W2PPH8 454 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 FAM90A27PA6NNH2 459 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 ANKRD30BLA7E2S9 258 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 CTAG2O75638 210 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 UBBP0CG47 229 aa17.83■□□□□ 0.44
PNKP-203ENST00000593946 RAB6AP20340 208 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms