RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 SLC7A6OSQ96CW6 309 aaPredicted RBP6.3□□□□□ -1.4
NPC1-208ENST00000590301 NRBF2Q96F24 287 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 HIST1H2AAQ96QV6 131 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 PCGF1Q9BSM1 259 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 PAPOLGQ9BWT3 736 aaKnown RBP6.3□□□□□ -1.4
NPC1-208ENST00000590301 PRRG3Q9BZD7 231 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 YIPF3Q9GZM5 350 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 SLITRK2Q9H156 845 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 OR51V1Q9H2C8 321 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 ZNF696Q9H7X3 374 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 MED20Q9H944 212 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 SLC25A19Q9HC21 320 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 DNAJB9Q9UBS3 223 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 RPUSD1Q9UJJ7 312 aaKnown RBP6.3□□□□□ -1.4
NPC1-208ENST00000590301 TMEM14AQ9Y6G1 99 aa6.3□□□□□ -1.4
NPC1-208ENST00000590301 PKD1L1Q8TDX9 2849 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 IGHV3OR16-10A0A075B7F0 116 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 IGHV1-69DA0A0B4J2H0 117 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 A0A0U1RQV5 110 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 A0A1B0GVI7 797 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 DVL1O14640 695 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
NPC1-208ENST00000590301 ZNF254O75437 659 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 GHRHP01286 108 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 IGHV1-69P01742 117 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 GYPAP02724 150 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CRYBA1P05813 215 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 ALOX5APP20292 161 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 ANOS1P23352 680 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 ROM1Q03395 351 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 DEFB112Q30KQ8 113 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 GFOD2Q3B7J2 385 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CDONQ4KMG0 1287 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 KLHL12Q53G59 568 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 LRRC10Q5BKY1 277 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 FAM76BQ5HYJ3 339 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 WDR38Q5JTN6 314 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 ZBTB37Q5TC79 503 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 LCN1P1Q5VSP4 162 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 BRD3OSQ6XYD6 125 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 Q6YL49 198 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 C1orf122Q6ZSJ8 110 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 ZNF826PQ6ZT77 177 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 BTN2A1Q7KYR7 527 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 TRPM8Q7Z2W7 1104 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 WDR86Q86TI4 376 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 SPATA24Q86W54 205 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CPOQ8IVL8 374 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 C11orf53Q8IXP5 236 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 C19orf18Q8NEA5 215 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 OR4F5Q8NH21 305 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 TBC1D15Q8TC07 691 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 NPRL2Q8WTW4 380 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 THEM6Q8WUY1 208 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 LRRC29Q8WV35 223 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 OR5P3Q8WZ94 311 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 MED30Q96HR3 178 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CLPTM1LQ96KA5 538 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 DUX5Q96PT3 197 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 TBX15Q96SF7 602 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 AMELYQ99218 206 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 SIRPDQ9H106 197 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CNTD2Q9H8S5 307 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 UNKLQ9H9P5 680 aaKnown RBP6.29□□□□□ -1.4
NPC1-208ENST00000590301 BEX1Q9HBH7 125 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 SMURF1Q9HCE7 757 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 ACOXLQ9NUZ1 547 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 HAO2Q9NYQ3 351 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 DNAJC27Q9NZQ0 273 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 LAMP5Q9UJQ1 280 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CAB39Q9Y376 341 aaPredicted RBP6.29□□□□□ -1.4
NPC1-208ENST00000590301 RHBDD3Q9Y3P4 386 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 PCDHGB1Q9Y5G3 927 aa6.29□□□□□ -1.4
NPC1-208ENST00000590301 CENPVL3A0A0U1RRI6 287 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 ZNF816-ZNF321PA0A0X1KG74 233 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 TCRBV3S1A0A5B6 114 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 NKX6-3A6NJ46 265 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 OR5B21A6NL26 309 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.28□□□□□ -1.4
NPC1-208ENST00000590301 CDIPTO14735 213 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 NDUFB3O43676 98 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 SELENOFO60613 162 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 FKBP6O75344 327 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 DNAJC8O75937 253 aaPredicted RBP6.28□□□□□ -1.4
NPC1-208ENST00000590301 NDUFA7O95182 113 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 SFTPBP07988 381 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 SLC2A5P22732 501 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 MAP2K3P46734 347 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 TGM4P49221 684 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 RPS7P62081 194 aaKnown RBP6.28□□□□□ -1.4
NPC1-208ENST00000590301 ESRRGP62508 458 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 CSNK2BP67870 215 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 CBX1P83916 185 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 PRDX4Q13162 271 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 ZNF829Q3KNS6 432 aaPredicted RBP6.28□□□□□ -1.4
NPC1-208ENST00000590301 STUMQ69YW2 141 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 FAHD1Q6P587 224 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 METAP1DQ6UB28 335 aaPredicted RBP6.28□□□□□ -1.4
NPC1-208ENST00000590301 KRT77Q7Z794 578 aa6.28□□□□□ -1.4
NPC1-208ENST00000590301 TMEM179BQ7Z7N9 219 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms