RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 NOS1APO75052 506 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 MTRF1O75570 445 aaKnown RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 CEACAM4O75871 244 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 NEURL1O76050 574 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 WDPCPO95876 746 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 CELA2AP08217 269 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 TMIGD3P0DMS9 266 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 CCL3P10147 92 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 CXCL3P19876 107 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 HTR2BP41595 481 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 RAD52P43351 418 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 CBX5P45973 191 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 EFNB2P52799 333 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 RAB14P61106 215 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 HIST1H3AP68431 136 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 SPOCK1Q08629 439 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 FGL1Q08830 312 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 PMPCAQ10713 525 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 SLC10A1Q14973 349 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 PPA1Q15181 289 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 OR1C1Q15619 314 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 PNLIPRP3Q17RR3 467 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 ACTBL2Q562R1 376 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 HIST2H3PS2Q5TEC6 136 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 B3GNTL1Q67FW5 361 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 RTL6Q6ICC9 239 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 ASPHD2Q6ICH7 369 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 SPINK14Q6IE38 97 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 FAHD2BQ6P2I3 314 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 MTFR2Q6P444 385 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 TEX261Q6UWH6 196 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 IGFL3Q6UXB1 125 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 HIST2H3AQ71DI3 136 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 MDGA2Q7Z553 956 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 GPAT4Q86UL3 456 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 BEST3Q8N1M1 668 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 TMEM178AQ8NBL3 297 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 FDCSPQ8NFU4 85 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 OR8H1Q8NGG4 311 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 KCNG3Q8TAE7 436 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 PP6455Q8WZ26 134 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 AQP3Q92482 292 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 SNAPC3Q92966 411 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 DNAJA3Q96EY1 480 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 CPNE2Q96FN4 548 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 FAHD2AQ96GK7 314 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 SCGB3A2Q96PL1 93 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 NPAS1Q99742 590 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 EMC6Q9BV81 110 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 NELFAQ9H3P2 528 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 ZNF552Q9H707 407 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 EXO5Q9H790 373 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 TMEM165Q9HC07 324 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 PROK2Q9HC23 129 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 ACKR4Q9NPB9 350 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 ZNF71Q9NQZ8 489 aaPredicted RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 SLC2A8Q9NY64 477 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 GLTPQ9NZD2 209 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 EIF3KQ9UBQ5 218 aaKnown RBP5.04□□□□□ -1.6
SDF2-206ENST00000587788 DKKL1Q9UK85 242 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 FLVCR2Q9UPI3 526 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 U3KQ87 197 aa5.04□□□□□ -1.6
SDF2-206ENST00000587788 IGKV1D-43A0A0B4J1Z2 117 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 PLSCR5A0PG75 271 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 OR2M5A3KFT3 312 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 A6NL46 340 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 C22orf46C9J442 243 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 F5H5P2 479 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 SMLR1H3BR10 107 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 H3BUI4 141 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 M0R233 179 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 DHHO43323 396 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 CA11O75493 328 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 SLC22A5O76082 557 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 KDM4BO94953 1096 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 CD3DP04234 171 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 AMY2AP04746 511 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 RLN1P04808 185 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 HPNP05981 417 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 RNASE1P07998 156 aaKnown RBP5.03□□□□□ -1.6
SDF2-206ENST00000587788 GLI4P10075 376 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 AMY2BP19961 511 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 ANXA7P20073 488 aaKnown RBP5.03□□□□□ -1.6
SDF2-206ENST00000587788 NFYAP23511 347 aaPredicted RBP5.03□□□□□ -1.6
SDF2-206ENST00000587788 AGTR1P30556 359 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 SFTPDP35247 375 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 THBS4P35443 961 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 ZNF93P35789 620 aaPredicted RBP5.03□□□□□ -1.6
SDF2-206ENST00000587788 ALDH3B1P43353 468 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 CX3CR1P49238 355 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 ZNF81P51508 661 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 CLDN17P56750 224 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 CARD18P57730 90 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 TAS2R31P59538 309 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 RAC3P60763 192 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 ZP1P60852 638 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 UBE2MP61081 183 aaKnown RBP5.03□□□□□ -1.6
SDF2-206ENST00000587788 TSPAN5P62079 268 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 ARG2P78540 354 aa5.03□□□□□ -1.6
SDF2-206ENST00000587788 MRPS34P82930 218 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms