RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 LFNGQ8NES3 379 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 MFRPQ9BY79 579 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 GAR1Q9NY12 217 aaKnown RBP9.39□□□□□ -0.91
USB1-212ENST00000566082 RARRES3Q9UL19 164 aa9.39□□□□□ -0.91
USB1-212ENST00000566082 HPNP05981 417 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 COL9A1P20849 921 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 ZBTB25P24278 435 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 DUSP1P28562 367 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 EIF2S3P41091 472 aaKnown RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 GPR3P46089 330 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 HTR5AP47898 357 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 SLC37A1P57057 533 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 OR1D5P58170 312 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 FOXF1Q12946 379 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 SHEQ5VZ18 495 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 MISPQ8IVT2 679 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 ARHGEF39Q8N4T4 335 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 C19orf12Q9NSK7 152 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 UFSP2Q9NUQ7 469 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 GNG13Q9P2W3 67 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 KIF26BQ2KJY2 2108 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 ZNF705FA8MVS1 300 aaPredicted RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 PRR32B1ATL7 298 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 CYB5BO43169 146 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 ZFAND5O76080 213 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 CST7O76096 145 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 CTSBP07858 339 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 ZNF705DP0CH99 300 aaPredicted RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 ZNF705BP0CI00 300 aaPredicted RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 MRPS21P82921 87 aaKnown RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 TLE4Q04727 773 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 CLEC12BQ2HXU8 276 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 PABPC1L2AQ5JQF8 200 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 FAM209BQ5JX69 171 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 C9orf135Q5VTT2 229 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 C6orf201Q7Z4U5 140 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 C20orf196Q8IYI0 205 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 OR10D4PQ8NGN7 298 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 KLF15Q9UIH9 416 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 GAB2Q9UQC2 676 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 TRBV5-7A0A0A0MS05 114 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 A0A1W2PP11 408 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 A0A1W2PPE2 198 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 RAB27BO00194 218 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 SSSCA1O60232 199 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 CAPZBP47756 277 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 PNLIPRP2P54317 469 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 PRSS12P56730 875 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 PDCD1Q15116 288 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 CEBPEQ15744 281 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 FHL5Q5TD97 284 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 FAHD2BQ6P2I3 314 aaPredicted RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 BRICD5Q6PL45 260 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 SGK3Q96BR1 496 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 TM4SF19Q96DZ7 209 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 RBMXL1Q96E39 390 aaKnown RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 ADAT3Q96EY9 351 aaPredicted RBP9.38□□□□□ -0.91
USB1-212ENST00000566082 FAHD2AQ96GK7 314 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 LURAP1Q96LR2 239 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 GFI1Q99684 422 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 SARGQ9BW04 601 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 NMES1Q9C002 83 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 FOXQ1Q9C009 403 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 OR51B6Q9H340 312 aa9.38□□□□□ -0.91
USB1-212ENST00000566082 TRAV14DV4A0A0A6YYC5 116 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 CD300LBA8K4G0 201 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 C17orf51A8MQB3 221 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 MPTX1A8MV57 137 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 H3BP45 60 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 PLPP3O14495 311 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 EFSO43281 561 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 ECI1P42126 302 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 ID4P47928 161 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 CSNK1EP49674 416 aaKnown RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 GRB2P62993 217 aaKnown RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 TESK1Q15569 626 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 KISS1Q15726 138 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 BATFQ16520 125 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 TMEM240Q5SV17 173 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 THEM4Q5T1C6 240 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 GGNBP1Q5YKI7 109 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 GAS2L1Q99501 681 aaPredicted RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 REG4Q9BYZ8 158 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 HS3ST3A1Q9Y663 406 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 TDRD6O60522 2096 aaKnown RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 H0YIG0 161 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 TNFSF14O43557 240 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 ACTL6AO96019 429 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 HBE1P02100 147 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 ASAH2BP0C7U1 165 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 SMIM6P0DI80 62 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 ZNF133P52736 654 aaPredicted RBP9.37□□□□□ -0.91
USB1-212ENST00000566082 ADIRFQ15847 76 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 TSPO2Q5TGU0 170 aa9.37□□□□□ -0.91
USB1-212ENST00000566082 LANCL3Q6ZV70 420 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms