RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CFL1P23528 166 aaKnown RBP10.39□□□□□ -0.75
SMAD3-208ENST00000558827 ARF6P62330 175 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 UBA52P62987 128 aaKnown RBP10.39□□□□□ -0.75
SMAD3-208ENST00000558827 MZT1Q08AG7 82 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 BAMBIQ13145 260 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 IKZF1Q13422 519 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 ODF4Q2M2E3 257 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 WDR38Q5JTN6 314 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 LCN1P1Q5VSP4 162 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 AADACL4Q5VUY2 407 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 C12orf73Q69YU5 71 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 KDM4DQ6B0I6 523 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 MOB3CQ70IA8 216 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 BATF2Q8N1L9 274 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 FAM216BQ8N7L0 139 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 CSNK2A3Q8NEV1 391 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 OR51G2Q8NGK0 314 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 TMEM163Q8TC26 289 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 UBE2FQ969M7 185 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 DACT3Q96B18 629 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-208ENST00000558827 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 OR8B4Q96RC9 309 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 CNN2Q99439 309 aaKnown RBP10.39□□□□□ -0.75
SMAD3-208ENST00000558827 MROQ9BYG7 248 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 PBOV1Q9GZY1 135 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 NIPAL2Q9H841 368 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 GPR84Q9NQS5 396 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 FAM206AQ9NX38 181 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 OAZ3Q9UMX2 235 aa10.39□□□□□ -0.75
SMAD3-208ENST00000558827 DNAJC9-AS1A6NH13 148 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 PHYHO14832 338 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 RPP14O95059 124 aaKnown RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 FAHP16930 419 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 GPM6AP51674 278 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 RIDAP52758 137 aaKnown RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 DLX1P56177 255 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 CXCR4P61073 352 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 KCNJ8Q15842 424 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 KCTD18Q6PI47 426 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF322Q6U7Q0 402 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 USP43Q70EL4 1123 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 BTN2A1Q7KYR7 527 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 SSX6Q7RTT6 188 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 THAP5Q7Z6K1 395 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 ZDHHC23Q8IYP9 409 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 GALNT4Q8N4A0 578 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 PLPP7Q8NBV4 271 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 SCCPDHQ8NBX0 429 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 FAM216AQ8WUB2 273 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 HPSE2Q8WWQ2 592 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 DNAJC9Q8WXX5 260 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 OR5P3Q8WZ94 311 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 UPRTQ96BW1 309 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 C1orf147Q96MC9 270 aaPredicted RBP10.38□□□□□ -0.75
SMAD3-208ENST00000558827 HIST1H2AAQ96QV6 131 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 JMJD8Q96S16 334 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 RTL8AQ9BWD3 113 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 RGCCQ9H4X1 137 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 ADGRL4Q9HBW9 690 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 SLC22A13Q9Y226 551 aa10.38□□□□□ -0.75
SMAD3-208ENST00000558827 A0A1W2PRD5 423 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 A0A1W2PRF3 423 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 A0A1W2PRM7 423 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF732B4DXR9 585 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF670-ZNF695F2Z2N8 137 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 P2RY10O00398 339 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ENSAO43768 121 aaKnown RBP10.37□□□□□ -0.75
SMAD3-208ENST00000558827 RHBDL1O75783 438 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 AMY2BP19961 511 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 CFPP27918 469 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 CFHR2P36980 270 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 MAP2K3P46734 347 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 EFNB1P98172 346 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 IL5RAQ01344 420 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 KPNB1Q14974 876 aaKnown RBP10.37□□□□□ -0.75
SMAD3-208ENST00000558827 MICBQ29980 383 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 DEFB112Q30KQ8 113 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 RHOUQ7L0Q8 258 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 DOK3Q7L591 496 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF679Q8IYX0 411 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 LHX4Q969G2 390 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZDHHC16Q969W1 377 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 CENPNQ96H22 339 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF488Q96MN9 340 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 TBX15Q96SF7 602 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 GABARAPL1Q9H0R8 117 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 RNPEPL1Q9HAU8 725 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 GPR173Q9NS66 373 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 AASSQ9UDR5 926 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 MRM2Q9UI43 246 aaKnown RBP10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF391Q9UJN7 358 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 PIGLQ9Y2B2 252 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 MPC1Q9Y5U8 109 aa10.37□□□□□ -0.75
SMAD3-208ENST00000558827 ZNF816-ZNF321PA0A0X1KG74 233 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 LOC110117498-PIK3R3F6TDL0 507 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 TOX4O94842 621 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 FSTL3O95633 263 aa10.36□□□□□ -0.75
SMAD3-208ENST00000558827 CST4P01036 141 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms