RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ERGIC3Q9Y282 383 aa4.93□□□□□ -1.62
SCAF11-213ENST00000550629 CAB39Q9Y376 341 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-213ENST00000550629 A0A0U1RQV5 110 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 A0A1W2PR80 420 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 DPRXA6NFQ7 191 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 A6NNC1 897 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 M0R135 149 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 HTR1AP08908 422 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ACSM4P0C7M7 580 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 CFL1P23528 166 aaKnown RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 EEF1B2P24534 225 aaKnown RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 HSD11B1P28845 292 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 RPS27P42677 84 aaKnown RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 TGM4P49221 684 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 CX3CR1P49238 355 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ETV1P50549 477 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 CCR9P51686 369 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 GBX2P52951 348 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 HCCSP53701 268 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 UCP2P55851 309 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 TAS2R43P59537 309 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 GALK2Q01415 458 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 BDH1Q02338 343 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ACSM1Q08AH1 577 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 IRF3Q14653 427 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 TBCEQ15813 527 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 OTPQ5XKR4 325 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 TMEM154Q6P9G4 183 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 MYO7BQ6PIF6 2116 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF773Q6PK81 442 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 LRRN1Q6UXK5 716 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 PRSS45Q7RTY3 260 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 RFLNBQ8N5W9 214 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 NANOGP1Q8N7R0 232 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 YIPF7Q8N8F6 280 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF485Q8NCK3 441 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 CCDC54Q8NEL0 328 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 OR5L1Q8NGL2 311 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 LINC01560Q8TB33 94 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 SMAP2Q8WU79 429 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 FCGR1BQ92637 280 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 C14orf79Q96F83 325 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF799Q96GE5 643 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ZC3HAV1LQ96H79 300 aaKnown RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 C4orf45Q96LM5 186 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 RHNO1Q9BSD3 238 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 C1QTNF6Q9BXI9 259 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 BCL2L14Q9BZR8 327 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 OPA3Q9H6K4 179 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ZNF442Q9H7R0 627 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ISYNA1Q9NPH2 558 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 CENPMQ9NSP4 180 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 PAK1IP1Q9NWT1 392 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 FAM206AQ9NX38 181 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 BABAM2Q9NXR7 383 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 LPAR3Q9UBY5 353 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 PLEKHB1Q9UF11 243 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 FBXO9Q9UK97 447 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 IKZF2Q9UKS7 526 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 COPS3Q9UNS2 423 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 RNF115Q9Y4L5 304 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 LRP12Q9Y561 859 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 SNX5Q9Y5X3 404 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 R4GMQ9 66 aa4.92□□□□□ -1.62
SCAF11-213ENST00000550629 SPTAN1Q13813 2472 aaKnown RBP4.92□□□□□ -1.62
SCAF11-213ENST00000550629 FREM1Q5H8C1 2179 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ALPK2Q86TB3 2170 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 DIDO1Q9BTC0 2240 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 A0A087WXM4 84 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 TMEM269A0A1B0GVZ9 245 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 LOC390937A0A1W2PQ73 354 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 TRIM64CA6NLI5 447 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 PRR32B1ATL7 298 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ATP6V1G2-DDX39BF2Z307 99 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 F5H5K5 113 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 LOC110117498-PIK3R3F6TDL0 507 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ABCD4O14678 606 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 MYL12BO14950 172 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 XRCC2O43543 280 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SMPD2O60906 423 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SRSF10O75494 262 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 CTAG2O75638 210 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 ISG15P05161 165 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 UBCP0CG48 685 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 CD53P19397 219 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 LOXP28300 417 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 C21orf33P30042 268 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SSTR2P30874 369 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 GLRXP35754 106 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 WNT5AP41221 380 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 EVX1P49640 407 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 WNT4P56705 351 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 OR12D2P58182 307 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 TIRAPP58753 221 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 GPR50Q13585 617 aa4.91□□□□□ -1.62
SCAF11-213ENST00000550629 KLF9Q13886 244 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-213ENST00000550629 SPHARQ15513 63 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms