RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 MSR1P21757 451 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 HTR5AP47898 357 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 UBE2V2Q15819 145 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 C5orf46Q6UWT4 87 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 CLEC18BQ6UXF7 455 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 NAXDQ8IW45 347 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 AQP3Q92482 292 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 TTC9Q92623 222 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 REEP6Q96HR9 211 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 DUSP23Q9BVJ7 150 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 CHRDQ9H2X0 955 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 PISDQ9UG56 409 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 MSGN1A6NI15 193 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 SHOXO15266 292 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 EFSO43281 561 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 BPNT1O95861 308 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 PSMB6P28072 239 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 CASRP41180 1078 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 PTGFRP43088 359 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 SSR4P51571 173 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 CEBPGP53567 150 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 FGL1Q08830 312 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 SNTB1Q13884 538 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 MEX3BQ6ZN04 569 aaKnown RBP12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 BPIFCQ8NFQ6 507 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF2Q9BSG1 426 aaPredicted RBP12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 FN3KRPQ9HA64 309 aa12.02□□□□□ -0.49
PRPF40B-209ENST00000548825 A0A0J9YW62 118 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 MFSD2BA6NFX1 497 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 HMSDA8MTL9 139 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 GPR31O00270 319 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 SRSF10O75494 262 aaKnown RBP12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 NAT1P18440 290 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 ZBTB25P24278 435 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 PTGDSP41222 190 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 AKR1C3P42330 323 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 SLC35A1P78382 337 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 C1orf100Q5SVJ3 147 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 DNASE2BQ8WZ79 361 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 MRGPRFQ96AM1 343 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 OR5AC2Q9NZP5 309 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 KIF25Q9UIL4 384 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 LHX6Q9UPM6 363 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 ZFHX4Q86UP3 3567 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 MED13Q9UHV7 2174 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 HSPB2A8KAH6 182 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 TNFSF12O43508 249 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 XRCC2O43543 280 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 DIRAS3O95661 229 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 FSTP19883 344 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 ID4P47928 161 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 RGS19P49795 217 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 RAB32Q13637 225 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 HSPB2Q16082 182 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 ESX1Q8N693 406 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 AGBL5Q8NDL9 886 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 MRPL13Q9BYD1 178 aaKnown RBP12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 SLCO5A1Q9H2Y9 848 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 IGKV1D-8A0A087WSZ0 117 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 DHHO43323 396 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 GDF1P27539 372 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 BVESQ8NE79 360 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 OR56B1Q8NGI3 324 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF845Q96IR2 970 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 C5orf66Q9H5L9 145 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 SLC17A5Q9NRA2 495 aa12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 CHCHD2Q9Y6H1 151 aaPredicted RBP12.01□□□□□ -0.49
PRPF40B-209ENST00000548825 PCNX1Q96RV3 2341 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 LOC105371267A0A1B0GV96 52 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 FAM74A7A6NL05 159 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 K7ESF4 209 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 SULT1C2O00338 296 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 OR7C1O76099 320 aaPredicted RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 P04436 131 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 ISG15P05161 165 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 RFPL3SP0C7P2 107 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 RCC1P18754 421 aaPredicted RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 MPGP29372 298 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 RBMXP38159 391 aaKnown RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 JMJD6Q6NYC1 403 aaPredicted RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 LINC00696Q6ZRV3 163 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 ACOT7LQ6ZUV0 252 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 PEG10Q86TG7 708 aaKnown RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 GJC3Q8NFK1 279 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 ABHD3Q8WU67 409 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 SAV1Q9H4B6 383 aaPredicted RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 CADP27708 2225 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 A0A1B0GW55 424 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 MEX3AA1L020 520 aaKnown RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 RNF222A6NCQ9 220 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DUX4L2P0CJ85 424 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DUX4L3P0CJ86 424 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DUX4L4P0CJ87 422 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DUX4L5P0CJ88 424 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DUX4L6P0CJ89 424 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms