RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PPP1R3EQ9H7J1 279 aa16.2■□□□□ 0.18
TNFRSF1B-204ENST00000536782 MED20Q9H944 212 aa16.2■□□□□ 0.18
TNFRSF1B-204ENST00000536782 BRD7Q9NPI1 651 aa16.2■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZNF319Q9P2F9 582 aa16.2■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ACOT8O14734 319 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 GLCEO94923 617 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 H2BFMP0C1H6 154 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OPRL1P41146 370 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 IKZF1Q13422 519 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 FAM98BQ52LJ0 330 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 LRRC10Q5BKY1 277 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 METAP1DQ6UB28 335 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 CD300LDQ6UXZ3 194 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OR10G2Q8NGC3 310 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 NPRL2Q8WTW4 380 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ITPKCQ96DU7 683 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 AMELYQ99218 206 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 NIPSNAP1Q9BPW8 284 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 RTL8AQ9BWD3 113 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 MMP27Q9H306 513 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 HAO2Q9NYQ3 351 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 TAS2R1Q9NYW7 299 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 MPC1Q9Y5U8 109 aa16.19■□□□□ 0.18
TNFRSF1B-204ENST00000536782 H3BN98 237 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 CLPXO76031 633 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 FBP1P09467 338 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 PAICSP22234 425 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 TGM4P49221 684 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 KRTAP10-3P60369 221 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 GUCA2AQ02747 115 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ATPAF1Q5TC12 328 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 TIGD4Q8IY51 512 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 IQCF1Q8N6M8 205 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OR5T2Q8NGG2 359 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OR10Z1Q8NGY1 313 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ASB9Q96DX5 294 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 DCTN5Q9BTE1 182 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 DNTTIP1Q9H147 329 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ABCB9Q9NP78 766 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 SIRT7Q9NRC8 400 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 DNAJB11Q9UBS4 358 aa16.18■□□□□ 0.18
TNFRSF1B-204ENST00000536782 BTBD17A6NE02 478 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 AMY2BP19961 511 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 EEF1B2P24534 225 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 GMFBP60983 142 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 PRDX4Q13162 271 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 GK3PQ14409 553 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 STUMQ69YW2 141 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZSCAN4Q8NAM6 433 aaPredicted RBP16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 H1FXQ92522 213 aaKnown RBP16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OR51V1Q9H2C8 321 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 SEMA6AQ9H2E6 1030 aa16.17■□□□□ 0.18
TNFRSF1B-204ENST00000536782 NKX6-3A6NJ46 265 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 TMEM210A6NLX4 147 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZNF850A8MQ14 1090 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 LYNP07948 512 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 PROK1P58294 105 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 TAF9Q16594 264 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 DNAL1Q4LDG9 190 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ASPHD2Q6ICH7 369 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 Q6ZSV7 163 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZNF454Q8N9F8 522 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OTOSQ8NHW6 89 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 C8orf46Q8TAG6 207 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 GIPC3Q8TF64 312 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 THEM6Q8WUY1 208 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 OR5P3Q8WZ94 311 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 RPL3LQ92901 407 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 RAB3IPQ96QF0 476 aaPredicted RBP16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 FEVQ99581 238 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 RBM4BQ9BQ04 359 aaKnown RBP16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 WDR13Q9H1Z4 485 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 SNTG1Q9NSN8 517 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZNRD1Q9P1U0 126 aa16.16■□□□□ 0.18
TNFRSF1B-204ENST00000536782 RNASEK-C17orf49H0YIS7 233 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 NPFFO15130 113 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 CST4P01036 141 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 SELLP14151 372 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ACKR3P25106 362 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 MS4A2Q01362 244 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 DHRS7BQ6IAN0 325 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZNF788Q6ZQV5 615 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 KCTD8Q6ZWB6 473 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 Q8N7P7 452 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 PIGCQ92535 297 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 UBE2FQ969M7 185 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 MED30Q96HR3 178 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 RNF170Q96K19 258 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 PKP2Q99959 881 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 THTPAQ9BU02 230 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 C16orf95Q9H693 158 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 TCF7L1Q9HCS4 588 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ZNF391Q9UJN7 358 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 VPREB3Q9UKI3 123 aa16.15■□□□□ 0.18
TNFRSF1B-204ENST00000536782 ARRDC5A6NEK1 342 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PRR23D1E9PI22 279 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 AKR7A2O43488 359 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 SELENOFO60613 162 aa16.14■□□□□ 0.17
TNFRSF1B-204ENST00000536782 PRR23D2P0DMB1 279 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms