RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 FAM216BQ8N7L0 139 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 SCCPDHQ8NBX0 429 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 DYRK2Q92630 601 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 SEH1LQ96EE3 360 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 CLPTM1LQ96KA5 538 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 ABCB9Q9NP78 766 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 TAS2R1Q9NYW7 299 aa13.87□□□□□ -0.19
CPSF1-207ENST00000531727 PDP1Q9P0J1 537 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-207ENST00000531727 A0A0U1RQK1 487 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 A0A1B0GVI7 797 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 TMEM210A6NLX4 147 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 GNGT2O14610 69 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 GPR37O15354 613 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 NDUFB3O43676 98 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 FAM107AO95990 144 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 CST4P01036 141 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 ACKR3P25106 362 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 TGM4P49221 684 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 ATPAF1Q5TC12 328 aaPredicted RBP13.86□□□□□ -0.19
CPSF1-207ENST00000531727 OLFML2AQ68BL7 652 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 C17orf107Q6ZR85 190 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 PDZD9Q8IXQ8 264 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 CCDC197Q8NCU1 140 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 OR10Z1Q8NGY1 313 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 OR5P3Q8WZ94 311 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 DNTTIP1Q9H147 329 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 C1orf21Q9H246 121 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 HAO2Q9NYQ3 351 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 ONECUT1Q9UBC0 465 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 ZNF391Q9UJN7 358 aa13.86□□□□□ -0.19
CPSF1-207ENST00000531727 CLPSL1A2RUU4 121 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 AQP12BA6NM10 295 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 ZNF850A8MQ14 1090 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 IGHV4-59P01825 116 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 HMGN1P05114 100 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 OSMP13725 252 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 AMY2BP19961 511 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 IER3P46695 156 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 PSMA6P60900 246 aaKnown RBP13.85□□□□□ -0.19
CPSF1-207ENST00000531727 CDK5Q00535 292 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 SRSF4Q08170 494 aaKnown RBP13.85□□□□□ -0.19
CPSF1-207ENST00000531727 IKZF1Q13422 519 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 LRRC10Q5BKY1 277 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 SLC35D3Q5M8T2 416 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 METAP1DQ6UB28 335 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-207ENST00000531727 CPOQ8IVL8 374 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 AQP12AQ8IXF9 295 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 OR5T2Q8NGG2 359 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 OR8B12Q8NGG6 310 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 CANT1Q8WVQ1 401 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 RPL3LQ92901 407 aaKnown RBP13.85□□□□□ -0.19
CPSF1-207ENST00000531727 LYZL4Q96KX0 146 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 RAB3IPQ96QF0 476 aaPredicted RBP13.85□□□□□ -0.19
CPSF1-207ENST00000531727 PKP2Q99959 881 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 DCTN5Q9BTE1 182 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 THTPAQ9BU02 230 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 NIPAL2Q9H841 368 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 ZNF556Q9HAH1 456 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 DNAJB11Q9UBS4 358 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 KLHDC2Q9Y2U9 406 aa13.85□□□□□ -0.19
CPSF1-207ENST00000531727 GPR137BO60478 399 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 HOXB6P17509 224 aaKnown RBP13.84□□□□□ -0.19
CPSF1-207ENST00000531727 GMFBP60983 142 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 FAM76BQ5HYJ3 339 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 KCTD8Q6ZWB6 473 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 CMTM4Q8IZR5 234 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 BBS1Q8NFJ9 593 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 C8orf46Q8TAG6 207 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 HPSE2Q8WWQ2 592 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 PIGCQ92535 297 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 RNF170Q96K19 258 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 CITED1Q99966 193 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 FGF23Q9GZV9 251 aaPredicted RBP13.84□□□□□ -0.19
CPSF1-207ENST00000531727 WDR13Q9H1Z4 485 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 LAMP5Q9UJQ1 280 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 LRP12Q9Y561 859 aa13.84□□□□□ -0.19
CPSF1-207ENST00000531727 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 E2F6O75461 281 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 SELLP14151 372 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 ALOX5APP20292 161 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 SLC2A5P22732 501 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 DCTDP32321 178 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 RPS7P62081 194 aaKnown RBP13.83□□□□□ -0.2
CPSF1-207ENST00000531727 BRICD5Q6PL45 260 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 ZNF788Q6ZQV5 615 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 KRT77Q7Z794 578 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 ZDHHC23Q8IYP9 409 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 HS3ST5Q8IZT8 346 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 Q8N7P7 452 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 NPRL2Q8WTW4 380 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 MED30Q96HR3 178 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 DPAGT1Q9H3H5 408 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 SLC25A19Q9HC21 320 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 SIRT7Q9NRC8 400 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 SNTG1Q9NSN8 517 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 CAB39Q9Y376 341 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-207ENST00000531727 FAM96BQ9Y3D0 163 aa13.83□□□□□ -0.2
CPSF1-207ENST00000531727 ZNF816-ZNF321PA0A0X1KG74 233 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms