RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 VPREB3Q9UKI3 123 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 C14orf166Q9Y224 244 aaKnown RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 OR10H1Q9Y4A9 318 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
HDAC3-216ENST00000523088 DUSP10Q9Y6W6 482 aa6.68□□□□□ -1.34
HDAC3-216ENST00000523088 BPTFQ12830 3046 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 KIF26BQ2KJY2 2108 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 COL27A1Q8IZC6 1860 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-216ENST00000523088 IGHV2OR16-5A0A0B4J2B6 119 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 LY6G6EA0A0G2JKS1 128 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 A0A0G2JN53 185 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TCRBV3S1A0A5B6 114 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ANKRD20A5PA0PJZ0 165 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM200CA6NKL6 621 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 A6NNC1 897 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 C15orf65H3BRN8 121 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 AIREO43918 545 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TPST2O60704 377 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CST1P01037 141 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ORM1P02763 201 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 DBHP09172 617 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 EBLN1P0CF75 366 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CR2P20023 1033 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TPSB2P20231 275 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TIA1P31483 386 aaKnown RBP eCLIP6.67□□□□□ -1.34
HDAC3-216ENST00000523088 KIR2DL3P43628 341 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CLDN12P56749 244 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TCTAP57738 103 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SESN2P58004 480 aaPredicted RBP6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SLC25A3Q00325 362 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 DPTQ07507 201 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF154Q13106 437 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 FOXE3Q13461 319 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CRMP1Q14194 572 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 PAFAH1B3Q15102 231 aaKnown RBP6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TPSAB1Q15661 275 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CDKN3Q16667 212 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ZNF542PQ5EBM4 170 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 C6orf226Q5I0X4 101 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.67□□□□□ -1.34
HDAC3-216ENST00000523088 LRRC73Q5JTD7 316 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 UTF1Q5T230 341 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TMEM236Q5W0B7 351 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 GUSBP11Q6P575 273 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 PRSS54Q6PEW0 395 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ENPP7Q6UWV6 458 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TOMM20LQ6UXN7 152 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 WDR82Q6UXN9 313 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 HIST2H3AQ71DI3 136 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 GLT6D1Q7Z4J2 308 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SLC35E3Q7Z769 313 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 RNF130Q86XS8 419 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 DEFB107AQ8IZN7 70 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 BPIFB2Q8N4F0 458 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SLC5A8Q8N695 610 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CHST4Q8NCG5 386 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR7G2Q8NG99 324 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR4K2Q8NGD2 314 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR52E4Q8NGH9 312 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR5A2Q8NGI9 324 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR51S1Q8NGJ8 323 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR6N1Q8NGY5 312 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 CANT1Q8WVQ1 401 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 FCAMRQ8WWV6 532 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 UCN3Q969E3 161 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 LHX4Q969G2 390 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 MCHR2Q969V1 340 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 VOPP1Q96AW1 172 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 GALMQ96C23 342 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SEH1LQ96EE3 360 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 WDR34Q96EX3 536 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 PIK3IP1Q96FE7 263 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 GALNT14Q96FL9 552 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 DCBLD2Q96PD2 775 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 IL17FQ96PD4 163 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 RAB40CQ96S21 281 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ATOH8Q96SQ7 321 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 LMF2Q9BU23 707 aaKnown RBP6.67□□□□□ -1.34
HDAC3-216ENST00000523088 C1orf43Q9BWL3 253 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 C1QTNF6Q9BXI9 259 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SYT4Q9H2B2 425 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SRMSQ9H3Y6 488 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 TUBB1Q9H4B7 451 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ZDHHC11Q9H8X9 412 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 MED29Q9NX70 200 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 ABI3Q9P2A4 366 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 DAPP1Q9UN19 280 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 OR51B2Q9Y5P1 312 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 FLVCR1Q9Y5Y0 555 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 COX11Q9Y6N1 276 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 U3KQA8 63 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 SCN8AQ9UQD0 1980 aa6.67□□□□□ -1.34
HDAC3-216ENST00000523088 A0A087X0T9 212 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 PRSS38A1L453 326 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 SMIM9A6NGZ8 99 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 IFITM5A6NNB3 132 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 ANKRD30BLA7E2S9 258 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 E9PQ18 207 aa6.66□□□□□ -1.34
HDAC3-216ENST00000523088 INMT-MINDY4F8WBC2 141 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms