RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 WDFY1Q8IWB7 410 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 SYCE1Q8N0S2 351 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 Q8N9L7 120 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR4K5Q8NGD3 323 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR52P1PQ8NH57 321 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 ENKURQ8TC29 256 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 RERGQ96A58 199 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 CCDC124Q96CT7 223 aaKnown RBP3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF488Q96MN9 340 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 C20orf144Q9BQM9 153 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 GGTLC1Q9BX51 225 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 FRMD8P1Q9BZ68 369 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 GOLPH3Q9H4A6 298 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 PLEKHF2Q9H8W4 249 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF222Q9UK12 451 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 RAB26Q9ULW5 256 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 AP3M1Q9Y2T2 418 aa3.42□□□□□ -1.86
HMGB1P47-201ENST00000511281 IGKV6D-21A0A0A0MT36 114 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 GOLGA8QA0A0J9YX86 632 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 RNASEK-C17orf49H0YIS7 233 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 MYL12BO14950 172 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 RAD51BO15315 384 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 SNAI2O43623 268 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 CD8AP01732 235 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 MMP7P09237 267 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 APLNRP35414 380 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 RGS6P49758 472 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 KRTAP10-3P60369 221 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 NAB1Q13506 487 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 MFSD14CQ5VZR4 134 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 RIMKLAQ8IXN7 391 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 C17orf78Q8N4C9 275 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR4D6Q8NGJ1 314 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR2Y1Q8NGV0 311 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR1S1Q8NH92 325 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 C18orf15Q96N68 181 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 OR4K3Q96R72 315 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF382Q96SR6 550 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 PDCD1LG2Q9BQ51 273 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 FGF23Q9GZV9 251 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 COA1Q9GZY4 146 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF355PQ9NSJ1 428 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 RHBDL2Q9NX52 303 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 MAT2BQ9NZL9 334 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 NXT1Q9UKK6 140 aaKnown RBP3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 NDRG2Q9UN36 371 aaKnown RBP3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 CCDC180Q9P1Z9 1646 aa3.41□□□□□ -1.86
HMGB1P47-201ENST00000511281 ZNF608Q9ULD9 1512 aaPredicted RBP3.4□□□□□ -1.86
HMGB1P47-201ENST00000511281 IGHV7-4-1A0A0J9YVY3 117 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 FAM240AA0A1B0GVK7 77 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF705GA8MUZ8 300 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 F8VP50 259 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 PLPP3O14495 311 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 CHST10O43529 356 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 HLA-DQA1P01909 254 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 MT-ND4P03905 459 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 CISD3P0C7P0 127 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 LIPCP11150 499 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 IL12BP29460 328 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 PRRC2AP48634 2157 aaKnown RBP3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 MTPNP58546 118 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 VSNL1P62760 191 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 CYP24A1Q07973 514 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 STX3Q13277 289 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 CDNFQ49AH0 187 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 LGI3Q8N145 548 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 DRAM1Q8N682 238 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 CYB561D1Q8N8Q1 229 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR10G2Q8NGC3 310 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR4M1Q8NGD0 313 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR1J4Q8NGS1 313 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR1L1Q8NH94 360 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 DOK4Q8TEW6 326 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 DCAKDQ8WVC6 231 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 C17orf50Q8WW18 174 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 RBBP8Q99708 897 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 NDFIP1Q9BT67 221 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 RSG1Q9BU20 258 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 C1orf198Q9H425 327 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 SDHAF2Q9NX18 166 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 MRM2Q9UI43 246 aaKnown RBP3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 AHDC1Q5TGY3 1603 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 C2orf16Q68DN1 1984 aa3.4□□□□□ -1.87
HMGB1P47-201ENST00000511281 CCL15-CCL14A0A0B4J2E2 113 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 A0A1B0GW15 77 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 J3QT63 122 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 SERPINB7O75635 380 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 CD74P04233 296 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF688P0C7X2 276 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 KIR3DL2P43630 455 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 CCL15Q16663 113 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 SYT6Q5T7P8 510 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 OPN5Q6U736 354 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 CDRT4Q8N9R6 151 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 ANGPTL6Q8NI99 470 aa3.39□□□□□ -1.87
HMGB1P47-201ENST00000511281 NT5CQ8TCD5 201 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms