RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 ZNF620Q6ZNG0 422 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 HSD17B13Q7Z5P4 300 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 C17orf78Q8N4C9 275 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 OR2AK2Q8NG84 335 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 OR6N1Q8NGY5 312 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 HAS2Q92819 552 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 MRGPRX4Q96LA9 322 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 SULT4A1Q9BR01 284 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 WDR13Q9H1Z4 485 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 NOX4Q9NPH5 578 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 PTTG3PQ9NZH4 202 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 OPN4Q9UHM6 478 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 K7ENP7 123 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 CLN5O75503 358 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 MED6O75586 246 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 HIST1H1CP16403 213 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 GPX4P36969 197 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 BIDP55957 195 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 INO80CQ6PI98 192 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 HIST2H3AQ71DI3 136 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 OR10D3Q8NH80 312 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 ABHD3Q8WU67 409 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 EDARADDQ8WWZ3 215 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 HCAR1Q9BXC0 346 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 SYT4Q9H2B2 425 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 EXOSC3Q9NQT5 275 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 FAM208BQ5VWN6 2430 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF726A6NNF4 738 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 ACTL6AO96019 429 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 GIPP09681 153 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 ABOP16442 354 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 PI3P19957 117 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 TUBG1P23258 451 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 SRD5A2P31213 254 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 HMGA2P52926 109 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 SUCLG1P53597 346 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 SNRPGP62308 76 aaKnown RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 TLE1Q04724 770 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF770Q6IQ21 691 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 FAM71CQ8NEG0 241 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 TRIB1Q96RU8 372 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 TOLLIPQ9H0E2 274 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 ING1Q9UK53 422 aaPredicted RBP7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 SIGLEC7Q9Y286 467 aa7.68□□□□□ -1.18
LIMCH1-209ENST00000509277 A0A087X0M5 115 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 A0A1B0GX30 115 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 A0A1W2PPE2 198 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 OR5H14A6NHG9 310 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF814B7Z6K7 855 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 DCTN6O00399 190 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 NCKAP5O14513 1909 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 NME2P1O60361 137 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 SELENOFO60613 162 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 SPARCP09486 303 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 CDK2P24941 298 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 CD34P28906 385 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 FMODQ06828 376 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 PGGHGQ32M88 737 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 KRT77Q7Z794 578 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 OR13C9Q8NGT0 318 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ZPLD1Q8TCW7 415 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 PPP1R1CQ8WVI7 109 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 PIPOXQ9P0Z9 390 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ZMIZ1Q9ULJ6 1067 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 SYNGR4O95473 234 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 CD3DP04234 171 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 IFNA4P05014 189 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 SFTPBP07988 381 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 GLI4P10075 376 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 PGAM2P15259 253 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 FAUP35544 74 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 LIMS1P48059 325 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ATP1B3P54709 279 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 FOXK2Q01167 660 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 FOXO1Q12778 655 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ACKR1Q16570 336 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 UEVLDQ8IX04 471 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 RFLNBQ8N5W9 214 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF511Q8NB15 262 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 CCDC54Q8NEL0 328 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 HPSE2Q8WWQ2 592 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 FAM46BQ96A09 425 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 S100A13Q99584 98 aa7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 ZNF703Q9H7S9 590 aaPredicted RBP7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 RALYQ9UKM9 306 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 SF3B6Q9Y3B4 125 aaKnown RBP7.67□□□□□ -1.18
LIMCH1-209ENST00000509277 SLC16A7O60669 478 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 LYPD3O95274 346 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 S100A8P05109 93 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 VSIG10L2P0DP72 767 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 PIPP12273 146 aaPredicted RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 FABP4P15090 132 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 OR2A2Q6IF42 318 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 OR10K2Q6IF99 312 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 NIPAL3Q6P499 406 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 RNF113BQ8IZP6 322 aaKnown RBP7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 SECTM1Q8WVN6 248 aa7.66□□□□□ -1.18
LIMCH1-209ENST00000509277 RAB3CQ96E17 227 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms