RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PUS1Q9Y606 427 aaKnown RBP eCLIP2.69□□□□□ -1.98
TRAPPC13-208ENST00000505553 CHD4Q14839 1912 aa2.69□□□□□ -1.98
TRAPPC13-208ENST00000505553 SYNJ1O43426 1573 aa2.69□□□□□ -1.98
TRAPPC13-208ENST00000505553 AK9Q5TCS8 1911 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGLV1-50A0A075B6I6 118 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TRAV19A0A0A6YYK7 116 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 A0A1B0GUA9 196 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 A6NDX4 124 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TRIM49D1C9J1S8 452 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TNFRSF11BO00300 401 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SULT1C2O00338 296 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TCAPO15273 167 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CRXO43186 299 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CD5LO43866 347 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 GLSO94925 669 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC25A27O95847 323 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CD8AP01732 235 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 BCHEP06276 602 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 DTYMKP23919 212 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 APLNRP35414 380 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 MAGEA3P43357 314 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ZNF136P52737 540 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 WNT4P56705 351 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 DSCR10P59022 87 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 NAB1Q13506 487 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TPBGQ13641 420 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 GUSBP1Q15486 140 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ZBTB6Q15916 424 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CDNFQ49AH0 187 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 PLEKHG7Q6ZR37 379 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 Q6ZVH6 145 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ZNF429Q86V71 674 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 PLCZ1Q86YW0 608 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ATPAF2Q8N5M1 289 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 Q8N9W7 124 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 OR8G5Q8NG78 346 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TNFRSF14Q92956 283 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 PHYHIPLQ96FC7 376 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ZNF514Q96K75 400 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 Q96MT0 163 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 C20orf144Q9BQM9 153 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SFXN3Q9BWM7 321 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC38A10Q9HBR0 1119 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RPS10P5Q9NQ39 176 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 NLE1Q9NVX2 485 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 IL17CQ9P0M4 197 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 OR12D3Q9UGF7 316 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CACNG2Q9Y698 323 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ADGRL1O94910 1474 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 KDM6BO15054 1643 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 MN1Q10571 1320 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGLV3-10A0A075B6K4 115 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGKV1-8A0A0C4DH67 115 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 DNASE2O00115 360 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ITGB1BP1O14713 200 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 PSPHP1O15172 72 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 NIPSNAP2O75323 286 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RP2O75695 350 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC22A5O76082 557 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 BRI3O95415 125 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 HSPD1P10809 573 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ADRB3P13945 408 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CXCR1P25024 350 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 TEAD1P28347 426 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CD70P32970 193 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RPA3P35244 121 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CRISP3P54108 245 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 PLTPP55058 493 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RPL23P62829 140 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 INCA1Q0VD86 236 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RBM48Q5RL73 367 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 IDNKQ5T6J7 187 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 HHATQ5VTY9 493 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 FBXW9Q5XUX1 488 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 HBMQ6B0K9 141 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 NCCRP1Q6ZVX7 275 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 FAM19A1Q7Z5A9 133 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 PCP2Q8IVA1 136 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 LINC00612Q8N6U2 182 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 ACBD4Q8NC06 268 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RXFP4Q8TDU9 374 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CAMK2N2Q96S95 79 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 C7orf50Q9BRJ6 194 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CHAC1Q9BUX1 264 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 UPF3BQ9BZI7 483 aaKnown RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC25A39Q9BZJ4 359 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC38A1Q9H2H9 487 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 IFI27L2Q9H2X8 130 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 HEBP1Q9NRV9 189 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 RBAKQ9NYW8 714 aaPredicted RBP2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 UBAP1Q9NZ09 502 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 VAX2Q9UIW0 290 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 SLC22A14Q9Y267 594 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 USH1CQ9Y6N9 552 aa2.68□□□□□ -1.98
TRAPPC13-208ENST00000505553 CLASP1Q7Z460 1538 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 MAP3K15Q6ZN16 1313 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 CFTRP13569 1480 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGHV5-51A0A0C4DH38 117 aa2.67□□□□□ -1.98
TRAPPC13-208ENST00000505553 IGHV3-64DA0A0J9YX35 117 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms