RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TMEM269A0A1B0GVZ9 245 aa8.79□□□□□ -1
NELFE-213ENST00000494956 TMEM89A2RUT3 159 aa8.79□□□□□ -1
NELFE-213ENST00000494956 ZAR1LA6NP61 321 aa8.79□□□□□ -1
NELFE-213ENST00000494956 H3BSH0 61 aa8.79□□□□□ -1
NELFE-213ENST00000494956 TMPRSS2O15393 492 aa8.79□□□□□ -1
NELFE-213ENST00000494956 AKR7A2O43488 359 aa8.79□□□□□ -1
NELFE-213ENST00000494956 RHBDL1O75783 438 aa8.79□□□□□ -1
NELFE-213ENST00000494956 HOXB6P17509 224 aaKnown RBP8.79□□□□□ -1
NELFE-213ENST00000494956 FASP25445 335 aa8.79□□□□□ -1
NELFE-213ENST00000494956 CFHR2P36980 270 aa8.79□□□□□ -1
NELFE-213ENST00000494956 GPM6AP51674 278 aa8.79□□□□□ -1
NELFE-213ENST00000494956 CXCR4P61073 352 aa8.79□□□□□ -1
NELFE-213ENST00000494956 ESRRGP62508 458 aa8.79□□□□□ -1
NELFE-213ENST00000494956 EFNB1P98172 346 aa8.79□□□□□ -1
NELFE-213ENST00000494956 BAMBIQ13145 260 aa8.79□□□□□ -1
NELFE-213ENST00000494956 IKZF1Q13422 519 aa8.79□□□□□ -1
NELFE-213ENST00000494956 WDR38Q5JTN6 314 aa8.79□□□□□ -1
NELFE-213ENST00000494956 AADACL4Q5VUY2 407 aa8.79□□□□□ -1
NELFE-213ENST00000494956 KCTD8Q6ZWB6 473 aa8.79□□□□□ -1
NELFE-213ENST00000494956 BTN2A1Q7KYR7 527 aa8.79□□□□□ -1
NELFE-213ENST00000494956 MEPCEQ7L2J0 689 aaKnown RBP8.79□□□□□ -1
NELFE-213ENST00000494956 SSX6Q7RTT6 188 aa8.79□□□□□ -1
NELFE-213ENST00000494956 SLC35F2Q8IXU6 374 aa8.79□□□□□ -1
NELFE-213ENST00000494956 FAM216BQ8N7L0 139 aa8.79□□□□□ -1
NELFE-213ENST00000494956 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
NELFE-213ENST00000494956 SCCPDHQ8NBX0 429 aa8.79□□□□□ -1
NELFE-213ENST00000494956 CSNK2A3Q8NEV1 391 aa8.79□□□□□ -1
NELFE-213ENST00000494956 OR51E1Q8TCB6 317 aa8.79□□□□□ -1
NELFE-213ENST00000494956 OR5P3Q8WZ94 311 aa8.79□□□□□ -1
NELFE-213ENST00000494956 RNF166Q96A37 237 aaPredicted RBP8.79□□□□□ -1
NELFE-213ENST00000494956 RNF170Q96K19 258 aa8.79□□□□□ -1
NELFE-213ENST00000494956 JMJD8Q96S16 334 aa8.79□□□□□ -1
NELFE-213ENST00000494956 TBX15Q96SF7 602 aa8.79□□□□□ -1
NELFE-213ENST00000494956 TBX5Q99593 518 aa8.79□□□□□ -1
NELFE-213ENST00000494956 CIB1Q99828 191 aa8.79□□□□□ -1
NELFE-213ENST00000494956 TEX12Q9BXU0 123 aa8.79□□□□□ -1
NELFE-213ENST00000494956 PBOV1Q9GZY1 135 aa8.79□□□□□ -1
NELFE-213ENST00000494956 GABARAPL1Q9H0R8 117 aa8.79□□□□□ -1
NELFE-213ENST00000494956 NIPAL2Q9H841 368 aa8.79□□□□□ -1
NELFE-213ENST00000494956 SP140LQ9H930 580 aa8.79□□□□□ -1
NELFE-213ENST00000494956 ADGRL4Q9HBW9 690 aa8.79□□□□□ -1
NELFE-213ENST00000494956 IKZF2Q9UKS7 526 aa8.79□□□□□ -1
NELFE-213ENST00000494956 GTF2A1LQ9UNN4 478 aa8.79□□□□□ -1
NELFE-213ENST00000494956 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
NELFE-213ENST00000494956 A6NIN4 97 aa8.78□□□□□ -1
NELFE-213ENST00000494956 ANXA2P2A6NMY6 339 aa8.78□□□□□ -1
NELFE-213ENST00000494956 ENSAO43768 121 aaKnown RBP8.78□□□□□ -1
NELFE-213ENST00000494956 SRSF10O75494 262 aaKnown RBP8.78□□□□□ -1
NELFE-213ENST00000494956 TTRP02766 147 aa8.78□□□□□ -1
NELFE-213ENST00000494956 MMP9P14780 707 aa8.78□□□□□ -1
NELFE-213ENST00000494956 FAHP16930 419 aa8.78□□□□□ -1
NELFE-213ENST00000494956 CFL1P23528 166 aaKnown RBP8.78□□□□□ -1
NELFE-213ENST00000494956 ARF6P62330 175 aa8.78□□□□□ -1
NELFE-213ENST00000494956 MZT1Q08AG7 82 aa8.78□□□□□ -1
NELFE-213ENST00000494956 SLC9A3R2Q15599 337 aa8.78□□□□□ -1
NELFE-213ENST00000494956 DEFB112Q30KQ8 113 aa8.78□□□□□ -1
NELFE-213ENST00000494956 LCN1P1Q5VSP4 162 aa8.78□□□□□ -1
NELFE-213ENST00000494956 NXNL2Q5VZ03 156 aa8.78□□□□□ -1
NELFE-213ENST00000494956 RBMS3Q6XE24 437 aaKnown RBP8.78□□□□□ -1
NELFE-213ENST00000494956 COMMD2Q86X83 199 aa8.78□□□□□ -1
NELFE-213ENST00000494956 ZDHHC13Q8IUH4 622 aa8.78□□□□□ -1
NELFE-213ENST00000494956 ZDHHC23Q8IYP9 409 aa8.78□□□□□ -1
NELFE-213ENST00000494956 BATF2Q8N1L9 274 aa8.78□□□□□ -1
NELFE-213ENST00000494956 GALNT4Q8N4A0 578 aa8.78□□□□□ -1
NELFE-213ENST00000494956 OR51G2Q8NGK0 314 aa8.78□□□□□ -1
NELFE-213ENST00000494956 FAM81AQ8TBF8 368 aa8.78□□□□□ -1
NELFE-213ENST00000494956 TMEM163Q8TC26 289 aa8.78□□□□□ -1
NELFE-213ENST00000494956 PYDC1Q8WXC3 89 aa8.78□□□□□ -1
NELFE-213ENST00000494956 DNAJC9Q8WXX5 260 aa8.78□□□□□ -1
NELFE-213ENST00000494956 DUS3LQ96G46 650 aaKnown RBP8.78□□□□□ -1
NELFE-213ENST00000494956 CNN2Q99439 309 aaKnown RBP8.78□□□□□ -1
NELFE-213ENST00000494956 MICU1Q9BPX6 476 aa8.78□□□□□ -1
NELFE-213ENST00000494956 RTL8AQ9BWD3 113 aa8.78□□□□□ -1
NELFE-213ENST00000494956 MROQ9BYG7 248 aa8.78□□□□□ -1
NELFE-213ENST00000494956 SIRPDQ9H106 197 aa8.78□□□□□ -1
NELFE-213ENST00000494956 TLNRD1Q9H1K6 362 aa8.78□□□□□ -1
NELFE-213ENST00000494956 RIBC2Q9H4K1 309 aa8.78□□□□□ -1
NELFE-213ENST00000494956 RGCCQ9H4X1 137 aa8.78□□□□□ -1
NELFE-213ENST00000494956 RNPEPL1Q9HAU8 725 aa8.78□□□□□ -1
NELFE-213ENST00000494956 ELL3Q9HB65 397 aaPredicted RBP8.78□□□□□ -1
NELFE-213ENST00000494956 GPR84Q9NQS5 396 aa8.78□□□□□ -1
NELFE-213ENST00000494956 DNAJB11Q9UBS4 358 aa8.78□□□□□ -1
NELFE-213ENST00000494956 OAZ3Q9UMX2 235 aa8.78□□□□□ -1
NELFE-213ENST00000494956 MPC1Q9Y5U8 109 aa8.78□□□□□ -1
NELFE-213ENST00000494956 SRRM5B3KS81 715 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 ZNF879B4DU55 563 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 ATP5HO75947 161 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 TOX4O94842 621 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 RPP14O95059 124 aaKnown RBP8.77□□□□□ -1.01
NELFE-213ENST00000494956 CST4P01036 141 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 IGLV3-1P01715 115 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 PPIAL4GP0DN37 164 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 CPT2P23786 658 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 PRTN3P24158 256 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 DCTDP32321 178 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 NPY4RP50391 375 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 RASSF2P50749 326 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 RIDAP52758 137 aaKnown RBP8.77□□□□□ -1.01
NELFE-213ENST00000494956 IL5RAQ01344 420 aa8.77□□□□□ -1.01
NELFE-213ENST00000494956 ROM1Q03395 351 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms