RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SRMP19623 302 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 RAB3AP20336 220 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 SDC2P34741 201 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 ZBTB37Q5TC79 503 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 FBXL14Q8N1E6 418 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 MUC15Q8N387 334 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 C10orf35Q96D05 121 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 SLITRK2Q9H156 845 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 CLEC4MQ9H2X3 399 aaPredicted RBP16.53■□□□□ 0.24
USP39-218ENST00000493829 ICE1Q9Y2F5 2266 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 IGKV1-9A0A0C4DH69 117 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 FAM230AA0A1W2PPH8 454 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 A6NHS1 94 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 SPRY3O43610 288 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 CTAG2O75638 210 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 CDRT1O95170 752 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 HCKP08631 526 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 IGFBP3P17936 291 aaPredicted RBP16.53■□□□□ 0.24
USP39-218ENST00000493829 MMP15P51511 669 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 OR8G1Q15617 311 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 TMEM42Q69YG0 159 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 OR8S1Q8NH09 359 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 ZNF420Q8TAQ5 688 aaPredicted RBP16.53■□□□□ 0.24
USP39-218ENST00000493829 PHYHIPQ92561 330 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 SLC30A2Q9BRI3 323 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 DYNLRB1Q9NP97 96 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 BATF3Q9NR55 127 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 TMEM100Q9NV29 134 aa16.53■□□□□ 0.24
USP39-218ENST00000493829 AK6Q9Y3D8 172 aaKnown RBP16.53■□□□□ 0.24
USP39-218ENST00000493829 MLNRO43193 412 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 ADRA2CP18825 462 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 ATF1P18846 271 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 AZGP1P25311 298 aaKnown RBP16.52■□□□□ 0.23
USP39-218ENST00000493829 CAV3P56539 151 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 OR10A3P58181 314 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 RNF144BQ7Z419 303 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 LRRTM1Q86UE6 522 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 OR2Z1Q8NG97 314 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 HPSE2Q8WWQ2 592 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 RFT1Q96AA3 541 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 FGF23Q9GZV9 251 aaPredicted RBP16.52■□□□□ 0.23
USP39-218ENST00000493829 SNTG1Q9NSN8 517 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 FOXJ3Q9UPW0 622 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 ROS1P08922 2347 aa16.52■□□□□ 0.23
USP39-218ENST00000493829 DOPEY2Q9Y3R5 2298 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 ANXA2P2A6NMY6 339 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 F5H5P2 479 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 M0R233 179 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 ZNF81P51508 661 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 GPM6AP51674 278 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 CNN3Q15417 329 aaKnown RBP16.51■□□□□ 0.23
USP39-218ENST00000493829 DDI2Q5TDH0 399 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 UTS2BQ765I0 119 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 ZCCHC24Q8N2G6 241 aaKnown RBP16.51■□□□□ 0.23
USP39-218ENST00000493829 OR52N4Q8NGI2 321 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 CGGBP1Q9UFW8 167 aaPredicted RBP16.51■□□□□ 0.23
USP39-218ENST00000493829 MPC1Q9Y5U8 109 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 PKDREJQ9NTG1 2253 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 DCHS2Q6V1P9 2916 aa16.51■□□□□ 0.23
USP39-218ENST00000493829 BDKRB2P30411 391 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 MTNR1BP49286 362 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 MST1LQ2TV78 715 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 ZNF529Q6P280 563 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 OR13G1Q8NGZ3 307 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 ITPKCQ96DU7 683 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 HIST1H2AAQ96QV6 131 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 GFI1Q99684 422 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 DCSTAMPQ9H295 470 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 NDUFA13Q9P0J0 144 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 LRBAP50851 2863 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 TRAV1-2A0A0B4J238 106 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 FAM221AA4D161 298 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 B9A039 149 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 SLC22A1O15245 554 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 GOSR1O95249 250 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 PLATP00750 562 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 SOD3P08294 240 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 THBS2P35442 1172 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 SNRPD2P62316 118 aaKnown RBP16.5■□□□□ 0.23
USP39-218ENST00000493829 TLE4Q04727 773 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 EFNB3Q15768 340 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 USP43Q70EL4 1123 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 NR2C2APQ86WQ0 139 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 ZNF295-AS1Q8N0V1 137 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 JAGN1Q8N5M9 183 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 OR5D18Q8NGL1 313 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 OR5P3Q8WZ94 311 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 ELMOD3Q96FG2 381 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 RNF170Q96K19 258 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 TMEM138Q9NPI0 162 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 SLC7A11Q9UPY5 501 aa16.5■□□□□ 0.23
USP39-218ENST00000493829 ABCA4P78363 2273 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 MAGEB3O15480 346 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 RAB3BP20337 219 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 RPS19P39019 145 aaKnown RBP16.49■□□□□ 0.23
USP39-218ENST00000493829 MOGQ16653 247 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 CEACAM21Q3KPI0 293 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 BORCS8Q96FH0 119 aa16.49■□□□□ 0.23
USP39-218ENST00000493829 BCL7BQ9BQE9 202 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms