RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	OR13C5	Q8NGS8	318 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	SYNPR	Q8TBG9	265 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	C10orf105	Q8TEF2	133 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	TSEN15	Q8WW01	171 aa	Known RBP	11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	RGP1	Q92546	391 aa	Predicted RBP	11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	TMEM203	Q969S6	136 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	SPSB4	Q96A44	273 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	SYT3	Q9BQG1	590 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	DYNLRB1	Q9NP97	96 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	CDC42EP3	Q9UKI2	254 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	HHLA2	Q9UM44	414 aa		11.13	□□□□□ -0.63
NR1H3-223	ENST00000486991	hCG_38984	A0A1B0GV85	526 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	LOC390937	A0A1W2PQ73	354 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991		H3BSA7	217 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	TIMM8A	O60220	97 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	MTRF1	O75570	445 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	DHRS3	O75911	302 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	CD1A	P06126	327 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	ZNF250	P15622	560 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	SELE	P16581	610 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	ZNF12	P17014	697 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	CCL1	P22362	96 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	USF1	P22415	310 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	MAP2K3	P46734	347 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	SOX2	P48431	317 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	EVX1	P49640	407 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	KLF3	P57682	345 aa	Predicted RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	SELENOV	P59797	346 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	PSG7	Q13046	419 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	MBNL2	Q5VZF2	373 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	CYB5R2	Q6BCY4	276 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	LRP11	Q86VZ4	500 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR5AS1	Q8N127	324 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	BHLHE23	Q8NDY6	225 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR56B2P	Q8NGI1	322 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	GPR148	Q8TDV2	347 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	MRPL24	Q96A35	216 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	TMIGD2	Q96BF3	282 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	HAVCR1	Q96D42	359 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	PIMREG	Q9BSJ6	248 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	MRPL37	Q9BZE1	423 aa	Known RBP	11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	MS4A5	Q9H3V2	200 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	CHODL	Q9H9P2	273 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	PLEKHA1	Q9HB21	404 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991	DHDH	Q9UQ10	334 aa		11.12	□□□□□ -0.63
NR1H3-223	ENST00000486991		A0A1W2PPW3	197 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991		A6NIN4	97 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	CD300LB	A8K4G0	201 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	LMX1B	O60663	402 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	OCM2	P0CE71	109 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	CD36	P16671	472 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	ZNF20	P17024	532 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	GABRA5	P31644	462 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	MAGEB1	P43366	347 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	RPL5	P46777	297 aa	Known RBP	11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	ALDH3B2	P48448	385 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	TRAM1	Q15629	374 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	ALKBH6	Q3KRA9	238 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	YIF1B	Q5BJH7	314 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	MS4A15	Q8N5U1	240 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	PLPP7	Q8NBV4	271 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	SEMA6D	Q8NFY4	1073 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR14K1	Q8NGZ2	314 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	C19orf24	Q9BVV8	132 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	SHARPIN	Q9H0F6	387 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	NDUFB11	Q9NX14	153 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	MYEF2	Q9P2K5	600 aa	Known RBP	11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	GPR160	Q9UJ42	338 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	PURG	Q9UJV8	347 aa	Known RBP	11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	PIGL	Q9Y2B2	252 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991		V9GYS6	101 aa		11.11	□□□□□ -0.63
NR1H3-223	ENST00000486991	VWC2L	B2RUY7	222 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	RGS9	O75916	674 aa	Predicted RBP	11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	SERPINA3	P01011	423 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	IGHV3-13	P01766	116 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	FAH	P16930	419 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	KITLG	P21583	273 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	ACKR3	P25106	362 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	PSMA1	P25786	263 aa	Known RBP	11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	TGFBR2	P37173	567 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	DDOST	P39656	456 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	GZMK	P49863	264 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	RPS11	P62280	158 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	RIPPLY1	Q0D2K3	151 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	INSL4	Q14641	139 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR8B8	Q15620	311 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	CARTPT	Q16568	116 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	NKPD1	Q17RQ9	610 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991		Q499Y3	187 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	ACSM3	Q53FZ2	586 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	TMEM255A	Q5JRV8	349 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	GPR141	Q7Z602	305 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	CCDC54	Q8NEL0	328 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	CSNK2A3	Q8NEV1	391 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR13F1	Q8NGS4	319 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	FGGY	Q96C11	551 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	YIPF6	Q96EC8	236 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	OR14A2	Q96R54	314 aa		11.1	□□□□□ -0.63
NR1H3-223	ENST00000486991	EXOSC4	Q9NPD3	245 aa	Known RBP	11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms