RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 DMBT1Q9UGM3 2413 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MYH15Q9Y2K3 1946 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 A0A1B0GW55 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MEIOCA2RUB1 952 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 LINC01553A4QN01 128 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FAM181BA6NEQ2 426 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 VSTM2BA6NLU5 285 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ERVV-1B6SEH8 477 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 C21orf140B9A014 251 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 F5H768 121 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 J3QLI3 93 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CCRL2O00421 344 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 UBDO15205 165 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FABP7O15540 132 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 PHF1O43189 567 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MPZL2O60487 215 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FKBP6O75344 327 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 AQP8O94778 261 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CTDNEP1O95476 244 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 NUDT3O95989 172 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 HPRT1P00492 218 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 BCHEP06276 602 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MELTFP08582 738 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FRMD6-AS1P0C7T7 363 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L2P0CJ85 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L3P0CJ86 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L4P0CJ87 422 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L5P0CJ88 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L6P0CJ89 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L7P0CJ90 424 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 LIPCP11150 499 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FUT3P21217 361 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 PRKACGP22612 351 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CMA1P23946 247 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CCNE1P24864 410 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SSTR5P35346 364 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 BTDP43251 543 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 GP2P55259 537 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DLX6P56179 175 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TAS2R31P59538 309 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 PAFAH1B2P68402 229 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RPL19P84098 196 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FAM3AP98173 230 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TWF1Q12792 350 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 KRR1Q13601 381 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 KIAA0141Q14154 515 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 GGTLC2Q14390 218 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 KCNJ11Q14654 390 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SMCO1Q147U7 214 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SLC9A3R2Q15599 337 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TRAM1Q15629 374 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TRIP13Q15645 432 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MAPK14Q16539 360 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 NRF1Q16656 503 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TBC1D28Q2M2D7 210 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 PARP15Q460N3 678 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ZBED5Q49AG3 693 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MS4A13Q5J8X5 152 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SIRPB2Q5JXA9 342 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FAM27D1Q5T7N8 215 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 HACD4Q5VWC8 232 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TRIQKQ629K1 86 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MED27Q6P2C8 311 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF530Q6P9A1 599 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DUX4L9Q6RFH8 374 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RBMS3Q6XE24 437 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ADAMTSL5Q6ZMM2 481 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 Q6ZT83 130 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 C9orf139Q6ZV77 190 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MYPOPQ86VE0 399 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 HORMAD1Q86X24 394 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RALGPS2Q86X27 583 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RIMKLAQ8IXN7 391 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 STK40Q8N2I9 435 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 METTL27Q8N6F8 245 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 NEXN-AS1Q8NBZ9 246 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ZNF114Q8NC26 417 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 OR2AE1Q8NHA4 323 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RFESDQ8TAC1 157 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MAPK15Q8TD08 544 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 GATAD1Q8WUU5 269 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TESCQ96BS2 214 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 DGCR14Q96DF8 476 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ADTRPQ96IZ2 230 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 C9orf85Q96MD7 179 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 WWC2-AS2Q96NR7 200 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SCGB3A2Q96PL1 93 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RBP7Q96R05 134 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SDHCQ99643 169 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 MRPL45Q9BRJ2 306 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 SSBP3Q9BWW4 388 aaPredicted RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 OR51B5Q9H339 312 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 REEP1Q9H902 201 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CAB39LQ9H9S4 337 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 RHOFQ9HBH0 211 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 TMEM27Q9HBJ8 222 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 ABCB9Q9NP78 766 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 EXOSC4Q9NPD3 245 aaKnown RBP2.39□□□□□ -2.03
HMGN4-202ENST00000477243 FBXO8Q9NRD0 319 aa2.39□□□□□ -2.03
HMGN4-202ENST00000477243 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms