RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 B9D2Q9BPU9 175 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 WNT10AQ9GZT5 417 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 DNTTIP1Q9H147 329 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 TLNRD1Q9H1K6 362 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 WDR13Q9H1Z4 485 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 OPA3Q9H6K4 179 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 TMBIM4Q9HC24 238 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 RPRD1BQ9NQG5 326 aaKnown RBP4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC25A10Q9UBX3 287 aaPredicted RBP4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 ZMAT5Q9UDW3 170 aaKnown RBP4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 KCNG2Q9UJ96 466 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF391Q9UJN7 358 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 SF3B6Q9Y3B4 125 aaKnown RBP4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 CAPN7Q9Y6W3 813 aa4.15□□□□□ -1.75
SNRNP40-204ENST00000474025 TRBV23-1A0A0A0MS06 115 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TRBV4-1A0A0J9YWV2 114 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A1W2PRQ8 180 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 OR6C68A6NDL8 312 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 NKX6-3A6NJ46 265 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ANKRD30BLA7E2S9 258 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 VGLL3A8MV65 326 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 CDIPTO14735 213 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 MRASO14807 208 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ARPC3O15145 178 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SIGLEC5O15389 551 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TIPRLO75663 272 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF682O95780 498 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 RENP00797 406 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 HLA-DQA2P01906 255 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TROVE2P10155 538 aaKnown RBP eCLIP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC2A1P11166 492 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 MSX2P35548 267 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 DDOSTP39656 456 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 RPS27P42677 84 aaKnown RBP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 PRKXP51817 358 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 CAV3P56539 151 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 GMFBP60983 142 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC35A2P78381 396 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM3AP98173 230 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 CD83Q01151 205 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 EGFEM1PQ0D2K5 195 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 BLMHQ13867 455 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 DGCR6Q14129 220 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SEC23BQ15437 767 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TMEM95Q3KNT9 176 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 IFI44LQ53G44 452 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 FGD3Q5JSP0 725 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 CBLL1Q75N03 491 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 RRM2BQ7LG56 351 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC16A9Q7RTY1 509 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TMEM219Q86XT9 240 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ZDHHC21Q8IVQ6 265 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 CYB561A3Q8NBI2 242 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SDR9C7Q8NEX9 313 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 OR9Q1Q8NGQ5 310 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 OR10Z1Q8NGY1 313 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 OR4K13Q8NH42 304 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 FANK1Q8TC84 345 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 MED30Q96HR3 178 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ERMAPQ96PL5 475 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 RAB3IPQ96QF0 476 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 DDOQ99489 341 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 COPS4Q9BT78 406 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TMEM120AQ9BXJ8 343 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 CDCA4Q9BXL8 241 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 FN3KQ9H479 309 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 PPP1R3EQ9H7J1 279 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ELL3Q9HB65 397 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 SNTG1Q9NSN8 517 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 HAO2Q9NYQ3 351 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 NKX1-2Q9UD57 310 aaPredicted RBP4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 TCF19Q9Y242 345 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 ENPP4Q9Y6X5 453 aa4.14□□□□□ -1.75
SNRNP40-204ENST00000474025 IGKV1D-17A0A075B6S4 117 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A0G2JND7 137 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 hCG_38984A0A1B0GV85 526 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 A0A1W2PRX2 142 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 A6NDX4 124 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 UNC119BA6NIH7 251 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM90A8PA6NJQ4 464 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 BBIP1A8MTZ0 92 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 E9PQ18 207 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 H0YAE9 185 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 CXCR6O00574 342 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 AKR7A2O43488 359 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 XRCC2O43543 280 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 H1F0P07305 194 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 ACAA1P09110 424 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 PF4V1P10720 104 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF823P16415 610 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 FAHP16930 419 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 NDUFB7P17568 137 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC6A6P31641 620 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 DCTDP32321 178 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 PYCR1P32322 319 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 NAA10P41227 235 aaPredicted RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 GSK3BP49841 420 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 SPIBQ01892 262 aa4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 CNN3Q15417 329 aaKnown RBP4.13□□□□□ -1.75
SNRNP40-204ENST00000474025 KLHL12Q53G59 568 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms