RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PPP1R7Q15435 360 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 RFTN2Q52LD8 501 aaPredicted RBP4.88□□□□□ -1.63
HDAC3-206ENST00000471968 ARMC4Q5T2S8 1044 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 MROH9Q5TGP6 573 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 RNF220Q5VTB9 566 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 OR4F3Q6IEY1 312 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 SLC2A7Q6PXP3 512 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 SMARCD3Q6STE5 483 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF367Q7RTV3 350 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 MRPL21Q7Z2W9 205 aaKnown RBP4.88□□□□□ -1.63
HDAC3-206ENST00000471968 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 OR1M1Q8NGA1 313 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 OR8S1Q8NH09 359 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 NFKBIDQ8NI38 313 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 NMD3Q96D46 503 aaKnown RBP4.88□□□□□ -1.63
HDAC3-206ENST00000471968 METTL2AQ96IZ6 378 aaKnown RBP4.88□□□□□ -1.63
HDAC3-206ENST00000471968 FCRL1Q96LA6 429 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 TMEM237Q96Q45 408 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 ZBTB18Q99592 522 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 DESI2Q9BSY9 194 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 NUF2Q9BZD4 464 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 TOLLIPQ9H0E2 274 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 C1orf21Q9H246 121 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 SLAMF8Q9P0V8 285 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 NLKQ9UBE8 527 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 ANGPT4Q9Y264 503 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 CCL27Q9Y4X3 112 aa4.88□□□□□ -1.63
HDAC3-206ENST00000471968 A0A1W2PRG6 482 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 TCRBV9S1A1TA0A576 114 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 GMNCA6NCL1 334 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 C11orf94C9JXX5 98 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 BHLHE40O14503 412 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 ZSCAN12O43309 604 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 AKR7A2O43488 359 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 PTP4A3O75365 173 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 C1QCP02747 245 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 NR2F1P10589 423 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 CPA3P15088 417 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 HTR2AP28223 471 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 PEX2P28328 305 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 NPBWR2P48146 333 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 PKNOX1P55347 436 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 ESRRGP62508 458 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 MALLQ13021 153 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 TAF13Q15543 124 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 OTPQ5XKR4 325 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 Q6ZWC4 215 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 CALHM1Q8IU99 346 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF676Q8N7Q3 588 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 MOSPD2Q8NHP6 518 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 HDAC2Q92769 488 aaKnown RBP4.87□□□□□ -1.63
HDAC3-206ENST00000471968 RCN3Q96D15 328 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 CLEC7AQ9BXN2 247 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 EVA1AQ9H8M9 152 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 MID1IP1Q9NPA3 183 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 LZTFL1Q9NQ48 299 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 POLE4Q9NR33 117 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 A4GNTQ9UNA3 340 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 PIGLQ9Y2B2 252 aa4.87□□□□□ -1.63
HDAC3-206ENST00000471968 MRPS28Q9Y2Q9 187 aaKnown RBP4.87□□□□□ -1.63
HDAC3-206ENST00000471968 GGT3PA6NGU5 568 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 LEUTXA8MZ59 168 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 PSMD9O00233 223 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 DLGAP1O14490 977 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 POLR3GO15318 223 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 TGOLN2O43493 480 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 CH25HO95992 272 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 SERPINA1P01009 418 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 LGALS1P09382 135 aaKnown RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF728P0DKX0 622 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 PSG2P11465 335 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 NCK1P16333 377 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 MNDAP41218 407 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 RAB9AP51151 201 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 DAP3P51398 398 aaKnown RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 GALNTL6Q49A17 601 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 CCDC92Q53HC0 331 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 FAM91A1Q658Y4 838 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ULK3Q6PHR2 472 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 FOXL2NBQ6ZUU3 175 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 HDDC2Q7Z4H3 204 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 LINC00596Q86U02 117 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 TSPYL5Q86VY4 417 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ZDHHC21Q8IVQ6 265 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 LRRC34Q8IZ02 419 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 KRTCAP2Q8N6L1 136 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 NATD1Q8N6N6 113 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 OR4A15Q8NGL6 344 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 OR56B4Q8NH76 319 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 DEFB104AQ8WTQ1 72 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ZBTB9Q96C00 473 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 FLYWCH2Q96CP2 140 aaKnown RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 DUSP26Q9BV47 211 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ABCG5Q9H222 651 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ARMC7Q9H6L4 198 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 PLEKHA1Q9HB21 404 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 MARCOQ9UEW3 520 aaPredicted RBP4.86□□□□□ -1.63
HDAC3-206ENST00000471968 SLC23A1Q9UHI7 598 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 ZNF222Q9UK12 451 aa4.86□□□□□ -1.63
HDAC3-206ENST00000471968 V9GYY5 206 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms