RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 TCP10Q12799 353 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 IMPG1Q17R60 797 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 COX19Q49B96 90 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 FAM45BPQ6NSW5 357 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 DNAJC24Q6P3W2 148 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 PLET1Q6UQ28 207 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 LYPD2Q6UXB3 125 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ZNF497Q6ZNH5 498 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 RNF165Q6ZSG1 346 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ATP6V1C2Q8NEY4 427 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ACTL9Q8TC94 416 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ACTRT1Q8TDG2 376 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 DCPSQ96C86 337 aaKnown RBP3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ZMYND19Q96E35 227 aaPredicted RBP3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 SAMD10Q9BYL1 202 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 LHX5Q9H2C1 402 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 EDA2RQ9HAV5 297 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 MYOZ1Q9NP98 299 aaPredicted RBP3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 C12orf4Q9NQ89 552 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 RBFOX1Q9NWB1 397 aaKnown RBP3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 VNN3Q9NY84 501 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 CD84Q9UIB8 345 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ANXA10Q9UJ72 324 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 TRAPPC4Q9Y296 219 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ERCC6Q03468 1493 aa3.79□□□□□ -1.8
TM9SF3-202ENST00000443638 ISPDA4D126 451 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 HPGDSO60760 199 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 NPIPB7O75200 414 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 IGLV2-23P01705 113 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 MMP7P09237 267 aaPredicted RBP3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 SYNJ2BPP57105 145 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 MTPNP58546 118 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 RHOAP61586 193 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 BAXQ07812 192 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 MGAT3Q09327 533 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 ARL9Q6T311 187 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 IL34Q6ZMJ4 242 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 LRRC34Q8IZ02 419 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 BLIDQ8IZY5 108 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 CEND1Q8N111 149 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 OR5T1Q8NG75 326 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 FAM45AQ8TCE6 357 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 FAM104AQ969W3 186 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 NTAN1Q96AB6 310 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 DNAJC19Q96DA6 116 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 TMEM56Q96MV1 263 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 ZNF599Q96NL3 588 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 GPR22Q99680 433 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 SLC25A2Q9BXI2 301 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 LINC00597Q9H2U6 94 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 RBM22Q9NW64 420 aaKnown RBP eCLIP3.78□□□□□ -1.83e-10■■□□□ 12.7
TM9SF3-202ENST00000443638 ZNF226Q9NYT6 803 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 EMC3Q9P0I2 261 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 UVRAGQ9P2Y5 699 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 HEBP2Q9Y5Z4 205 aa3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 NUP153P49790 1475 aaKnown RBP3.78□□□□□ -1.8
TM9SF3-202ENST00000443638 PALLDQ8WX93 1383 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 NFASCO94856 1347 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 IGHV1-69DA0A0B4J2H0 117 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 CIB4A0PJX0 185 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 PLAC8L1A1L4L8 177 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 GPR171O14626 319 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 SLC16A4O15374 487 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 SUPT7LO94864 414 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 CAPN2P17655 700 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 CLDN12P56749 244 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 RAB8AP61006 207 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 HERVK_113P61574 105 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 RPL10AP62906 217 aaKnown RBP3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 INCA1Q0VD86 236 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 TMEM31Q5JXX7 168 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 METTL21CQ5VZV1 264 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 TMEM236Q5W0B7 351 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 MTERF4Q7Z6M4 381 aaKnown RBP3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 PHOSPHO2Q8TCD6 241 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 MRAP2Q96G30 205 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 TMEM101Q96IK0 257 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 BIRC8Q96P09 236 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 PARP12Q9H0J9 701 aaKnown RBP3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 MDFICQ9P1T7 246 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 TRMT112Q9UI30 125 aaKnown RBP3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 NDRG2Q9UN36 371 aaKnown RBP3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 SIGLEC7Q9Y286 467 aa3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 TDRD15B5MCY1 1934 aaKnown RBP3.77□□□□□ -1.81
TM9SF3-202ENST00000443638 PLEKHG1Q9ULL1 1385 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 EPOPA6NHQ4 379 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 F5H768 121 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 MMP23AO75900 390 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 VAMP5O95183 116 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 TRBV12-3P01733 135 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 CD74P04233 296 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 GIPP09681 153 aaPredicted RBP3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 CTXN2P0C2S0 81 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 CRISP2P16562 243 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 ZNF7P17097 686 aaPredicted RBP3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 EVI2BP34910 448 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 DLX6P56179 175 aa3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 CAPRIN1Q14444 709 aaKnown RBP3.76□□□□□ -1.81
TM9SF3-202ENST00000443638 TBC1D28Q2M2D7 210 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms