RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 APOL4Q9BPW4 351 aa14.7□□□□□ -0.06
LSM5-204ENST00000409909 MICU1Q9BPX6 476 aa14.7□□□□□ -0.06
LSM5-204ENST00000409909 PBOV1Q9GZY1 135 aa14.7□□□□□ -0.06
LSM5-204ENST00000409909 H2AFY2Q9P0M6 372 aaPredicted RBP14.7□□□□□ -0.06
LSM5-204ENST00000409909 ERVK-18Q9QC07 812 aa14.7□□□□□ -0.06
LSM5-204ENST00000409909 A0A1B0GW55 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 SAC3D1A6NKF1 404 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 SLC22A31A6NKX4 558 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 ANXA2P2A6NMY6 339 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 SRSF10O75494 262 aaKnown RBP14.69□□□□□ -0.06
LSM5-204ENST00000409909 IGLV3-1P01715 115 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L2P0CJ85 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L3P0CJ86 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L4P0CJ87 422 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L5P0CJ88 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L6P0CJ89 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L7P0CJ90 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 CXCR4P61073 352 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 FGF12P61328 243 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 MFGE8Q08431 387 aaPredicted RBP14.69□□□□□ -0.06
LSM5-204ENST00000409909 SNCBQ16143 134 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 FAM76BQ5HYJ3 339 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4L9Q6RFH8 374 aaPredicted RBP14.69□□□□□ -0.06
LSM5-204ENST00000409909 ZNF322Q6U7Q0 402 aaPredicted RBP14.69□□□□□ -0.06
LSM5-204ENST00000409909 SLC35F2Q8IXU6 374 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 OR51E1Q8TCB6 317 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 RPL3LQ92901 407 aaKnown RBP14.69□□□□□ -0.06
LSM5-204ENST00000409909 RTL8AQ9BWD3 113 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 OSBPL10Q9BXB5 764 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 GABARAPL3Q9BY60 117 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 HAO2Q9NYQ3 351 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DUX4Q9UBX2 424 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 IKZF2Q9UKS7 526 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 NBEAL1Q6ZS30 2694 aa14.69□□□□□ -0.06
LSM5-204ENST00000409909 DVL1O14640 695 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 ENSAO43768 121 aaKnown RBP14.68□□□□□ -0.06
LSM5-204ENST00000409909 PLATP00750 562 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 MUC1P15941 1255 aaPredicted RBP14.68□□□□□ -0.06
LSM5-204ENST00000409909 MAP2K3P46734 347 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 RIDAP52758 137 aaKnown RBP14.68□□□□□ -0.06
LSM5-204ENST00000409909 UBA52P62987 128 aaKnown RBP14.68□□□□□ -0.06
LSM5-204ENST00000409909 MICBQ29980 383 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 CD276Q5ZPR3 534 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 DOK3Q7L591 496 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 ZDHHC23Q8IYP9 409 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 FGFRL1Q8N441 504 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 SCCPDHQ8NBX0 429 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 RNF170Q96K19 258 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 C1orf147Q96MC9 270 aaPredicted RBP14.68□□□□□ -0.06
LSM5-204ENST00000409909 CCL13Q99616 98 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 RIBC2Q9H4K1 309 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 ABCB9Q9NP78 766 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 GPR84Q9NQS5 396 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 CLN6Q9NWW5 311 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 KAAG1Q9UBP8 84 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 NUFIP1Q9UHK0 495 aaKnown RBP14.68□□□□□ -0.06
LSM5-204ENST00000409909 ENOPH1Q9UHY7 261 aa14.68□□□□□ -0.06
LSM5-204ENST00000409909 TRAV40A0A0B4J280 105 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 TMEM210A6NLX4 147 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 SRRM5B3KS81 715 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 H3BNX3 289 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 TMPRSS2O15393 492 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 TTRP02766 147 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 AMY2BP19961 511 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 ACTR3P61158 418 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 KPNB1Q14974 876 aaKnown RBP14.67□□□□□ -0.06
LSM5-204ENST00000409909 ZNF829Q3KNS6 432 aaPredicted RBP14.67□□□□□ -0.06
LSM5-204ENST00000409909 DMRTC1Q5HYR2 192 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 WDR38Q5JTN6 314 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 PLEKHG7Q6ZR37 379 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 C9orf139Q6ZV77 190 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 SSX6Q7RTT6 188 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 GID4Q8IVV7 300 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 OR5T2Q8NGG2 359 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 OR51G2Q8NGK0 314 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 FAM81AQ8TBF8 368 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 FAM71F1Q96KD3 344 aaPredicted RBP14.67□□□□□ -0.06
LSM5-204ENST00000409909 MNTQ99583 582 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 MS4A7Q9GZW8 240 aaPredicted RBP14.67□□□□□ -0.06
LSM5-204ENST00000409909 WDR13Q9H1Z4 485 aa14.67□□□□□ -0.06
LSM5-204ENST00000409909 MRM2Q9UI43 246 aaKnown RBP14.67□□□□□ -0.06
LSM5-204ENST00000409909 ZNF816-ZNF321PA0A0X1KG74 233 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 TMEM89A2RUT3 159 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 SFTPBP07988 381 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 GPM6AP51674 278 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 GMFBP60983 142 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 ACTG1P63261 375 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 CEP78Q5JTW2 689 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 RBMS3Q6XE24 437 aaKnown RBP14.66□□□□□ -0.06
LSM5-204ENST00000409909 KCTD8Q6ZWB6 473 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 BTN2A1Q7KYR7 527 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 COMMD2Q86X83 199 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 OR10Z1Q8NGY1 313 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 DUX5Q96PT3 197 aa14.66□□□□□ -0.06
LSM5-204ENST00000409909 RBM4BQ9BQ04 359 aaKnown RBP14.66□□□□□ -0.06
LSM5-204ENST00000409909 WARS2Q9UGM6 360 aaKnown RBP14.66□□□□□ -0.06
LSM5-204ENST00000409909 DNAJC9-AS1A6NH13 148 aa14.65□□□□□ -0.06
LSM5-204ENST00000409909 ZNF879B4DU55 563 aa14.65□□□□□ -0.06
LSM5-204ENST00000409909 ZNF670-ZNF695F2Z2N8 137 aa14.65□□□□□ -0.06
LSM5-204ENST00000409909 AKR7A2O43488 359 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms