RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 FANCEQ9HB96 536 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 TMEM165Q9HC07 324 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 MRPS30Q9NP92 439 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 RPRD1BQ9NQG5 326 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 GID8Q9NWU2 228 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ADA2Q9NZK5 511 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF225Q9UK10 706 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 LSM7Q9UK45 103 aaKnown RBP3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PCTPQ9UKL6 214 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 PPIL1Q9Y3C6 166 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 NEUROG3Q9Y4Z2 214 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 TIMM22Q9Y584 194 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 UTRNP46939 3433 aa3.44□□□□□ -1.86
HMGB3P18-201ENST00000406327 SRCAPQ6ZRS2 3230 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRAV19A0A0A6YYK7 116 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRBV9A0A0B4J1U6 114 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 C1orf232A0A0U1RR37 186 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 A0A1B0GTQ1 180 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 A0A1W2PP18 115 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TCRBV3S1A0A5B6 114 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 IQCF5A8MTL0 148 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 H0YJX3 145 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 RAD51BO15315 384 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC31A2O15432 143 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 CHST1O43916 411 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 NPPAP01160 153 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 CD70P32970 193 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 CA5AP35218 305 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 AQP4P55087 323 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 PAX5Q02548 391 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 MED21Q13503 144 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 FBXO48Q5FWF7 155 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 CDKL4Q5MAI5 379 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 SCIMPQ6UWF3 145 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 FAM151BQ6UXP7 276 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TPGS1Q6ZTW0 290 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 SNX20Q7Z614 316 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 SPATA24Q86W54 205 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 DHFR2Q86XF0 187 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 MMAAQ8IVH4 418 aaKnown RBP3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 BBS7Q8IWZ6 715 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 PNKDQ8N490 385 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 GPR26Q8NDV2 337 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR2L5Q8NG80 312 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR10G9Q8NGN4 311 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR1S2Q8NGQ3 325 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR9I1Q8NGQ6 314 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 NRGNQ92686 78 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TMEM101Q96IK0 257 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 LYSMD1Q96S90 227 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC29A1Q99808 456 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TM6SF2Q9BZW4 377 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 OR51J1Q9H342 316 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 SRMSQ9H3Y6 488 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 ASB8Q9H765 288 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 CMTM6Q9NX76 183 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 RAB26Q9ULW5 256 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 BTRCQ9Y297 605 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 GOLT1BQ9Y3E0 138 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 AP4S1Q9Y587 144 aa3.43□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRIP11Q15643 1979 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 NLRC5Q86WI3 1866 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRPM7Q96QT4 1865 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 TRAV25A0A0B4J276 109 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 GLYATL1P3A0A0U1RQE8 302 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 KBTBD11-OT1A0A1B0GTJ5 212 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 A0A1W2PQ67 120 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 A8MUA0 341 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 FXYD1O00168 92 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 NME4O00746 187 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 HAT1O14929 419 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 MRPS12O15235 138 aaKnown RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 SLC25A14O95258 325 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 OTCP00480 354 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 UBTFL6P0CB48 400 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 AK4P27144 223 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 SPAM1P38567 509 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 HSPA13P48723 471 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 POLR2JP52435 117 aaKnown RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ZNF92Q03936 586 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 EMX2Q04743 252 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 BNIP2Q12982 314 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 ECH1Q13011 328 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 RCAN2Q14206 197 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 DMC1Q14565 340 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 LRRC26Q2I0M4 334 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 PGGHGQ32M88 737 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 C18orf21Q32NC0 220 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 COA6Q5JTJ3 125 aaKnown RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 PAGE3Q5JUK9 113 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 PLCXD3Q63HM9 321 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 CNIH2Q6PI25 160 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 TMEM220Q6QAJ8 160 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 UGT2A3Q6UWM9 527 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 SBSNQ6UWP8 590 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 Q6ZSR3 168 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 TMEM25Q86YD3 366 aa3.42□□□□□ -1.86
HMGB3P18-201ENST00000406327 CMTM8Q8IZV2 173 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms