RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 KIR2DS3Q14952 304 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 OR2T2Q6IF00 324 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 FAM180AQ6UWF9 173 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 C17orf78Q8N4C9 275 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 ZNF610Q8N9Z0 462 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 SLC22A18Q96BI1 424 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 TAAR9Q96RI9 348 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 SLC26A1Q9H2B4 701 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 ELL3Q9HB65 397 aaPredicted RBP15.15■□□□□ 0.02
PTPRA-205ENST00000399903 PARPBPQ9NWS1 579 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 MMP17Q9ULZ9 603 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 COA3Q9Y2R0 106 aaPredicted RBP15.15■□□□□ 0.02
PTPRA-205ENST00000399903 ARGFXA6NJG6 315 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 CTLA4P16410 223 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 UBE2KP61086 200 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 RPS4XP62701 263 aaKnown RBP15.15■□□□□ 0.02
PTPRA-205ENST00000399903 MGAT2Q10469 447 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 RHEBQ15382 184 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 NPSR1Q6W5P4 371 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 TGIF2-C20orf24A0A0A6YYL0 155 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 DBX1A6NMT0 343 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 CYTIPO60759 359 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 VSIG8P0DPA2 414 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 CHATP28329 748 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 MRPS21P82921 87 aaKnown RBP15.15■□□□□ 0.02
PTPRA-205ENST00000399903 FZD2Q14332 565 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 KHDC3LQ587J8 217 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 BEND4Q6ZU67 534 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 HOGA1Q86XE5 327 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 RAB18Q9NP72 206 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 ZNF701Q9NV72 531 aaPredicted RBP15.15■□□□□ 0.02
PTPRA-205ENST00000399903 LUZP4Q9P127 313 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 OR52A1Q9UKL2 312 aa15.15■□□□□ 0.02
PTPRA-205ENST00000399903 MEGF11A6BM72 1044 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF878C9JN71 531 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 JTBO76095 146 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SOD3P08294 240 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 OR5B2Q96R09 309 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SLC35B3Q9H1N7 401 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 PILRAQ9UKJ1 303 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 CELSR3Q9NYQ7 3312 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF587BE7ETH6 402 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SOX15O60248 233 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SLC2A1P11166 492 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF823P16415 610 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SLC6A9P48067 706 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 TAS2R60P59551 318 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 ACKR1Q16570 336 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SP6Q3SY56 376 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 REC114Q7Z4M0 266 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 DCXRQ7Z4W1 244 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 C19orf12Q9NSK7 152 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 PCDH15Q96QU1 1955 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 CDC14CA4D256 554 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF708P17019 499 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 SUPT4H1P63272 117 aaKnown RBP15.14■□□□□ 0.01
PTPRA-205ENST00000399903 FAHD2BQ6P2I3 314 aaPredicted RBP15.14■□□□□ 0.01
PTPRA-205ENST00000399903 PEG10Q86TG7 708 aaKnown RBP15.14■□□□□ 0.01
PTPRA-205ENST00000399903 FNDC9Q8TBE3 224 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 FAHD2AQ96GK7 314 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 FOXQ1Q9C009 403 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 MRPL22Q9NWU5 206 aaKnown RBP15.14■□□□□ 0.01
PTPRA-205ENST00000399903 MTCH2Q9Y6C9 303 aa15.14■□□□□ 0.01
PTPRA-205ENST00000399903 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 TNFSF12O43508 249 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 HCRTR2O43614 444 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 CXCL1P09341 107 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 HIST1H1BP16401 226 aaKnown RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 DHPSP49366 369 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 EGR4Q05215 589 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF239Q16600 458 aaKnown RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 WBP2NLQ6ICG8 309 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 PLXDC2Q6UX71 529 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 BCORP1Q8N888 145 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF524Q96C55 264 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 REEP6Q96HR9 211 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 CCDC163A0A0D9SF12 145 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 CRTAPO75718 401 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 HOXC4P09017 264 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 PAX6P26367 422 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 BTG2P78543 158 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 ZNF385CQ66K41 422 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 BAHD1Q8TBE0 780 aaPredicted RBP15.13■□□□□ 0.01
PTPRA-205ENST00000399903 THRSPQ92748 146 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 GPR132Q9UNW8 380 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 SLC5A6Q9Y289 635 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 RP1P56715 2156 aa15.13■□□□□ 0.01
PTPRA-205ENST00000399903 CDRT15L2A8MXV6 281 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 H0YL77 283 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 FMODQ06828 376 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 HEPN1Q6WQI6 88 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 MED12Q93074 2177 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 TM4SF19Q96DZ7 209 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 THOC3Q96J01 351 aaKnown RBP15.12■□□□□ 0.01
PTPRA-205ENST00000399903 PBDC1Q9BVG4 233 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 CYR61O00622 381 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 SYT7O43581 403 aa15.12■□□□□ 0.01
PTPRA-205ENST00000399903 HEXBP07686 556 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms