RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 TMEM272A0A1B0GTI8 110 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 HCKP08631 526 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 CTRB1P17538 263 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 WNT5AP41221 380 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 PITPNBP48739 271 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 INPP1P49441 399 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 GSK3AP49840 483 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 LY6DQ14210 128 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 ZNF57Q68EA5 555 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 CTRB2Q6GPI1 263 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 MTFR2Q6P444 385 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 METAP1DQ6UB28 335 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 Q6ZSR3 168 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 BIVMQ86UB2 503 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 TCTE3Q8IZS6 198 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 NKAIN3Q8N8D7 197 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 WDR31Q8NA23 367 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 ZFAND1Q8TCF1 268 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 RFT1Q96AA3 541 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 GPR173Q9NS66 373 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 hCG_38984A0A1B0GV85 526 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 LOC390937A0A1W2PQ73 354 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 CRHP06850 196 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 CD37P11049 281 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 ZNF14P17017 642 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 BMP5P22003 454 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 CFPP27918 469 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 THBS4P35443 961 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 ZNF93P35789 620 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 KLRB1Q12918 225 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 IKZF1Q13422 519 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 GK2Q14410 553 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 GCDHQ92947 438 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 PIGTQ969N2 578 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 ZFP3Q96NJ6 502 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 CHST5Q9GZS9 411 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 PTTG3PQ9NZH4 202 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 ZNF835Q9Y2P0 537 aa10.55□□□□□ -0.72
SPTBN1-203ENST00000389980 A0A0G2JNJ9 132 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 LOC100289279A0A1B0GTE1 492 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 PTHLHP12272 177 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 ARSBP15848 533 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 ART1P52961 327 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 C1orf100Q5SVJ3 147 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 BEND4Q6ZU67 534 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 BHLHA15Q7RTS1 189 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 DPPA2Q7Z7J5 298 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 OR5D18Q8NGL1 313 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 OR6M1Q8NGM8 313 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 ENKURQ8TC29 256 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 SORCS2Q96PQ0 1159 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 METTL17Q9H7H0 456 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 Q9UFV3 132 aa10.54□□□□□ -0.72
SPTBN1-203ENST00000389980 ERVH48-1M5A8F1 160 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 EEF1E1O43324 174 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 XRCC2O43543 280 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 HOXD4P09016 255 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 CDK2P24941 298 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 HOXC12P31275 282 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 MAP2K3P46734 347 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 OR3A4PP47883 348 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 SPATA46Q5T0L3 261 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 ALKBH2Q6NS38 261 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 CRIP3Q6Q6R5 217 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 SLC38A6Q8IZM9 456 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 SPSB4Q96A44 273 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 APOBEC3DQ96AK3 386 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 CRIM1Q9NZV1 1036 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 ETV7Q9Y603 341 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 MEIOCA2RUB1 952 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 EEF1E1-BLOC1S5C9J1V9 151 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 LYRM1O43325 122 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 GMDSO60547 372 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 KDM4BO94953 1096 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 FAM157BP0CG42 384 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 SRP9P49458 86 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 RIN1Q13671 783 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 P2RY6Q15077 328 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 ANGPTL5Q86XS5 388 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 C1orf162Q8NEQ5 155 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 PP6455Q8WZ26 134 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 AKAP1Q92667 903 aaKnown RBP eCLIP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 FAM46BQ96A09 425 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 FOXRED1Q96CU9 486 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 HAVCR1Q96D42 359 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 S100A16Q96FQ6 103 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 CCDC120Q96HB5 630 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 GPER1Q99527 375 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 THAP7Q9BT49 309 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 MRI1Q9BV20 369 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 SFXN3Q9BWM7 321 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 ABCG5Q9H222 651 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 RGCCQ9H4X1 137 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 NLKQ9UBE8 527 aa10.53□□□□□ -0.72
SPTBN1-203ENST00000389980 NOS1APO75052 506 aaPredicted RBP10.52□□□□□ -0.72
SPTBN1-203ENST00000389980 TMEM127O75204 238 aa10.52□□□□□ -0.72
SPTBN1-203ENST00000389980 CTAG2O75638 210 aa10.52□□□□□ -0.72
SPTBN1-203ENST00000389980 HLA-DQB1P01920 261 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms