RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HERPUD1Q15011 391 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 DGUOKQ16854 277 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 GFOD2Q3B7J2 385 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 KPRPQ5T749 579 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 LINC01590Q5TEZ4 76 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF788Q6ZQV5 615 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 OR52H1Q8NGJ2 320 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 OR4Q3Q8NH05 313 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 ANGPTL6Q8NI99 470 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 RNF133Q8WVZ7 376 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 C17orf50Q8WW18 174 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 RPL3LQ92901 407 aaKnown RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 GAFA1Q96PS6 74 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 MICU1Q9BPX6 476 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 ABHD6Q9BV23 337 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 TSSK6Q9BXA6 273 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 FGF23Q9GZV9 251 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 TOR3AQ9H497 397 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 METTL8Q9H825 291 aaKnown RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 TBC1D23Q9NUY8 699 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 DNAJC27Q9NZQ0 273 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF391Q9UJN7 358 aa11.26□□□□□ -0.61
CXCL12-202ENST00000374426 NKX6-3A6NJ46 265 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 ANXA2P2A6NMY6 339 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 H3BUX3 64 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 SIGLEC5O15389 551 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 AKR7A2O43488 359 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 ACKR3P25106 362 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 OPRL1P41146 370 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 EFNB2P52799 333 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 IL5RAQ01344 420 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 SAMD5Q5TGI4 173 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 NCR3LG1Q68D85 454 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 HCP5Q6MZN7 132 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 Q6ZTK2 550 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 CSNK2A3Q8NEV1 391 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 OR10Z1Q8NGY1 313 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 AJUBAQ96IF1 538 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 AMELYQ99218 206 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 RTL8AQ9BWD3 113 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 SP140LQ9H930 580 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 BRD7Q9NPI1 651 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF446Q9NWS9 450 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF281Q9Y2X9 895 aa11.25□□□□□ -0.61
CXCL12-202ENST00000374426 KMT2CQ8NEZ4 4911 aaKnown RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 A0A1W2PQ09 198 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 ZNF850A8MQ14 1090 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 TNFRSF11BO00300 401 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 SOX14O95416 240 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 APOC1P02654 83 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 PRB2P02812 416 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 ACAA1P09110 424 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 DCTDP32321 178 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 BLVRAP53004 296 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 CAV3P56539 151 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 PPP1R8Q12972 351 aaKnown RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 PRDX4Q13162 271 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 FAM76BQ5HYJ3 339 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 SAMD4BQ5PRF9 694 aaKnown RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 Q6ZPA2 131 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 ERI1Q8IV48 349 aaKnown RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 FTMTQ8N4E7 242 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 LINC00471Q8N535 108 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 AQP11Q8NBQ7 271 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 OR2T33Q8NG76 320 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 OR6N2Q8NGY6 317 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 HPSE2Q8WWQ2 592 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 OR5P3Q8WZ94 311 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 CFHR4Q92496 578 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 DUS3LQ96G46 650 aaKnown RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 MED30Q96HR3 178 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 INTS14Q96SY0 518 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 SSX3Q99909 188 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 RGCCQ9H4X1 137 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 MED20Q9H944 212 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
CXCL12-202ENST00000374426 ARMC1Q9NVT9 282 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 FOXJ3Q9UPW0 622 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 BAIAP2Q9UQB8 552 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 MAB21L2Q9Y586 359 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 MPC1Q9Y5U8 109 aa11.24□□□□□ -0.61
CXCL12-202ENST00000374426 MEGF11A6BM72 1044 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 TMEM210A6NLX4 147 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 CCNB2O95067 398 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 CST4P01036 141 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 NDUFB7P17568 137 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 KIR2DS4P43632 304 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 LY6EQ16553 131 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 CRIP3Q6Q6R5 217 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 PGAM4Q8N0Y7 254 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 KLHDC1Q8N7A1 406 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 OR51G2Q8NGK0 314 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 RORBQ92753 470 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 PGAM5Q96HS1 289 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 CDRT15Q96T59 188 aa11.23□□□□□ -0.61
CXCL12-202ENST00000374426 ELAC2Q9BQ52 826 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms