RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 SPANXN5Q5MJ07 72 aa13.83□□□□□ -0.2
SRPK1-204ENST00000373825 WBP2NLQ6ICG8 309 aa13.83□□□□□ -0.2
SRPK1-204ENST00000373825 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.2
SRPK1-204ENST00000373825 IRF7Q92985 503 aa13.83□□□□□ -0.2
SRPK1-204ENST00000373825 LMF2Q9BU23 707 aaKnown RBP13.83□□□□□ -0.2
SRPK1-204ENST00000373825 PRODH2Q9UF12 536 aa13.83□□□□□ -0.2
SRPK1-204ENST00000373825 B9D1Q9UPM9 204 aa13.83□□□□□ -0.2
SRPK1-204ENST00000373825 PVRP15151 417 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 NANOS3P60323 173 aaKnown RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 TSPO2Q5TGU0 170 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 BTNL8Q6UX41 500 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 NANOS1Q8WY41 292 aaKnown RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 FGF13Q92913 245 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 CHST5Q9GZS9 411 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 CACFD1Q9UGQ2 172 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 ST6GALNAC2Q9UJ37 374 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 FBLL1A6NHQ2 334 aaKnown RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 IAPPP10997 89 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 CSNK1A1P48729 337 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 OR51E1Q8TCB6 317 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 PGLYRP3Q96LB9 341 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 ZMIZ1Q9ULJ6 1067 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 F6UZH7 168 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 DUSP11O75319 330 aaKnown RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 HSBP1O75506 76 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 CSF2RAP15509 400 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 ADCYAP1P18509 176 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 BCL6P41182 706 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 DMRTC2Q8IXT2 367 aaPredicted RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 FAM160A2Q8N612 972 aaPredicted RBP13.82□□□□□ -0.2
SRPK1-204ENST00000373825 FRRS1LQ9P0K9 344 aa13.82□□□□□ -0.2
SRPK1-204ENST00000373825 TRBV5-4A0A0C4DH59 114 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 TBPP20226 339 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 RPS4XP62701 263 aaKnown RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 PLCXD2Q0VAA5 305 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 CAPNS2Q96L46 248 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 TNFRSF10CO14798 259 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 DLEU1O43261 78 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 GPR75O95800 540 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 OR5G3P0C626 314 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 USF1P22415 310 aaPredicted RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 OR4A47Q6IF82 309 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 FIGLAQ6QHK4 219 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 SLC36A1Q7Z2H8 476 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 ADAMTS17Q8TE56 1095 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 HCSTQ9UBK5 93 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 MIA3Q5JRA6 1907 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 TMEM127O75204 238 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 FGF19O95750 216 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 OR1D4P47884 311 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 ADPRHP54922 357 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 RPS23P62266 143 aaKnown RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 RELQ04864 619 aaPredicted RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 ATP6V1FQ16864 119 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 PDLIM3Q53GG5 364 aaPredicted RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 ZNF813Q6ZN06 617 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 NEUROG3Q9Y4Z2 214 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 LNP1A1A4G5 178 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 COX5BP10606 129 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 BCKDHBP21953 392 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 APLNRP35414 380 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 DUSP8Q13202 625 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 ZNF468Q5VIY5 522 aaPredicted RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 KIRREL2Q6UWL6 708 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 OR2D3Q8NGH3 330 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 WBP2Q969T9 261 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 C4orf45Q96LM5 186 aa13.81□□□□□ -0.2
SRPK1-204ENST00000373825 RIMS4Q9H426 269 aaPredicted RBP13.81□□□□□ -0.2
SRPK1-204ENST00000373825 RAMP1O60894 148 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 CRISP2P16562 243 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 TNFSF10P50591 281 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 TGFBR3Q03167 851 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 MALLQ13021 153 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 UHRF2Q96PU4 802 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 SERINC2Q96SA4 455 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HSPB9Q9BQS6 159 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 OR6C3Q9NZP0 311 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 MAP1LC3B2A6NCE7 125 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BKO60814 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 TIMP1P01033 207 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 LCATP04180 440 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BJP06899 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BOP23527 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 FPR2P25090 351 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BBP33778 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 SEC13P55735 322 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BDP58876 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BCP62807 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST2H2BEQ16778 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.8□□□□□ -0.2
SRPK1-204ENST00000373825 OR5AU1Q8NGC0 362 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BHQ93079 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 MRPL24Q96A35 216 aaKnown RBP13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BNQ99877 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 HIST1H2BMQ99879 126 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 MAP1LC3BQ9GZQ8 125 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 LPAR5Q9H1C0 372 aa13.8□□□□□ -0.2
SRPK1-204ENST00000373825 PRSS50Q9UI38 385 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms