RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CLN3Q13286 438 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 CNN3Q15417 329 aaKnown RBP12.27□□□□□ -0.45
USF1-202ENST00000368020 LGALSLQ3ZCW2 172 aaPredicted RBP12.27□□□□□ -0.45
USF1-202ENST00000368020 C11orf88Q6PI97 169 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 SLC16A14Q7RTX9 510 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 FAM89BQ8N5H3 189 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 ARRDC1Q8N5I2 433 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.45
USF1-202ENST00000368020 SCGB3A2Q96PL1 93 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 ZMAT3Q9HA38 289 aaKnown RBP12.27□□□□□ -0.45
USF1-202ENST00000368020 OPN4Q9UHM6 478 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 PIGLQ9Y2B2 252 aa12.27□□□□□ -0.45
USF1-202ENST00000368020 NCOR2Q9Y618 2525 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 IGKV1-9A0A0C4DH69 117 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 TSC22D2O75157 780 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 CRTAPO75718 401 aaPredicted RBP12.26□□□□□ -0.45
USF1-202ENST00000368020 NEURL1O76050 574 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 SYNGR4O95473 234 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 SPINK2P20155 84 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 NFYAP23511 347 aaPredicted RBP12.26□□□□□ -0.45
USF1-202ENST00000368020 CPT2P23786 658 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 ITGA3P26006 1051 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 CLDN15P56746 228 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
USF1-202ENST00000368020 CXADRP78310 365 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 KRTAP27-1Q3LI81 207 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 SCGB2B2Q4G0G5 96 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 VAX1Q5SQQ9 334 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 ATPAF1Q5TC12 328 aaPredicted RBP12.26□□□□□ -0.45
USF1-202ENST00000368020 LIN54Q6MZP7 749 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 ZNF100Q8IYN0 542 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 C12orf45Q8N5I9 185 aaPredicted RBP12.26□□□□□ -0.45
USF1-202ENST00000368020 SLC6A7Q99884 636 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 OCSTAMPQ9BR26 566 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 RNF122Q9H9V4 155 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 CA10Q9NS85 328 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 ZNF224Q9NZL3 707 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 KLF13Q9Y2Y9 288 aaPredicted RBP12.26□□□□□ -0.45
USF1-202ENST00000368020 PCSK5Q92824 1860 aa12.26□□□□□ -0.45
USF1-202ENST00000368020 PLSCR5A0PG75 271 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 OR14I1A6ND48 311 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TUBAL3A6NHL2 446 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 G3V3Q6 166 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 SLC22A5O76082 557 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 GNB3P16520 340 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 OR1C1Q15619 314 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 RSPO1Q2MKA7 263 aaPredicted RBP12.25□□□□□ -0.45
USF1-202ENST00000368020 SPINK14Q6IE38 97 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 SLC25A42Q86VD7 318 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TMEM17Q86X19 198 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 ZNF680Q8NEM1 530 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 OR52B4Q8NGK2 314 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 ROBO4Q8WZ75 1007 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TM2D1Q9BX74 207 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 GPR35Q9HC97 309 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 MCTS1Q9ULC4 181 aaKnown RBP12.25□□□□□ -0.45
USF1-202ENST00000368020 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 MED13Q9UHV7 2174 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 L7N2F9 121 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 MFNGO00587 321 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 GOSR2O14653 212 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 NOS1APO75052 506 aaPredicted RBP12.25□□□□□ -0.45
USF1-202ENST00000368020 MRPL33O75394 65 aaKnown RBP12.25□□□□□ -0.45
USF1-202ENST00000368020 FCER2P06734 321 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 FAHP16930 419 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 AGTR1P30556 359 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TAS2R46P59540 309 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 CEACAM16Q2WEN9 425 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 SLC22A6Q4U2R8 563 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 GALNTL5Q7Z4T8 443 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TMED4Q7Z7H5 227 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 SULF2Q8IWU5 870 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TMEM104Q8NE00 496 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 OR4K15Q8NH41 348 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 CMBLQ96DG6 245 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 REEP6Q96HR9 211 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 ALKBH3Q96Q83 286 aaPredicted RBP12.25□□□□□ -0.45
USF1-202ENST00000368020 HEXA-AS1Q9H8Q6 139 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 TMEM165Q9HC07 324 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 PCDHB16Q9NRJ7 776 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 UBQLN2Q9UHD9 624 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 KCNK7Q9Y2U2 307 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
USF1-202ENST00000368020 MAB21L2Q9Y586 359 aa12.25□□□□□ -0.45
USF1-202ENST00000368020 ANKRD34BA5PLL1 514 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 WIPF3A6NGB9 483 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 KLRC4-KLRK1H3BQV0 150 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 XRCC2O43543 280 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 TOXO94900 526 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 FCGR2AP12318 317 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 MGMTP16455 207 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 ZNF32P17041 273 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 HRH1P35367 487 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 HTR5AP47898 357 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 STARP49675 285 aa12.24□□□□□ -0.45
USF1-202ENST00000368020 LHX2P50458 406 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms