RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 Q8N7P7 452 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 DTX3Q8N9I9 347 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 LY6G5BQ8NDX9 201 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 OR2T33Q8NG76 320 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 OR8D4Q8NGM9 314 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 OR2T29Q8NH02 315 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 OR5M11Q96RB7 305 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 CCL13Q99616 98 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 DGCR6LQ9BY27 220 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 SAMHD1Q9Y3Z3 626 aaKnown RBP12.9□□□□□ -0.34
DDX55-202ENST00000354291 U3KQK5 164 aa12.9□□□□□ -0.34
DDX55-202ENST00000354291 A0A1B0GW55 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 GMDSO60547 372 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 PEX14O75381 377 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 GRPP07492 148 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 PAX6P26367 422 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 HOXD3P31249 432 aaPredicted RBP12.89□□□□□ -0.35
DDX55-202ENST00000354291 RPS27P42677 84 aaKnown RBP12.89□□□□□ -0.35
DDX55-202ENST00000354291 UBE2E1P51965 193 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 SLC25A1P53007 311 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 ELF3P78545 371 aaPredicted RBP12.89□□□□□ -0.35
DDX55-202ENST00000354291 PPP1R8Q12972 351 aaKnown RBP12.89□□□□□ -0.35
DDX55-202ENST00000354291 GK3PQ14409 553 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 TAF13Q15543 124 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
DDX55-202ENST00000354291 DCXRQ7Z4W1 244 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 OR51L1Q8NGJ5 315 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 OR9Q1Q8NGQ5 310 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 ZNRF4Q8WWF5 429 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 SERTAD4Q9NUC0 356 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 PRPF19Q9UMS4 504 aaKnown RBP12.89□□□□□ -0.35
DDX55-202ENST00000354291 COMMD3-BMI1R4GMX3 469 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 U3KQV3 271 aa12.89□□□□□ -0.35
DDX55-202ENST00000354291 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 GGT3PA6NGU5 568 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 A6NLC8 198 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 CD300LBA8K4G0 201 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 ZNF593O00488 134 aaPredicted RBP12.88□□□□□ -0.35
DDX55-202ENST00000354291 IFNGP01579 166 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 PF4V1P10720 104 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 ENTPD1P49961 510 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 SLC35A2P78381 396 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 MS4A2Q01362 244 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 ZNF92Q03936 586 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 CRMP1Q14194 572 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 PCK2Q16822 640 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 LRRC75BQ2VPJ9 315 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 TEX30Q5JUR7 227 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 CRIP3Q6Q6R5 217 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 CD300LDQ6UXZ3 194 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 PLPP7Q8NBV4 271 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 CCDC197Q8NCU1 140 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 PAPD5Q8NDF8 572 aaKnown RBP12.88□□□□□ -0.35
DDX55-202ENST00000354291 TNFRSF14Q92956 283 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 LRGUKQ96M69 825 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 KCNJ15Q99712 375 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 COPS4Q9BT78 406 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 DCTN5Q9BTE1 182 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 OPA3Q9H6K4 179 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 KAAG1Q9UBP8 84 aa12.88□□□□□ -0.35
DDX55-202ENST00000354291 RIIAD1A6NNX1 92 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 CHST1O43916 411 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 SOX14O95416 240 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 FAM107AO95990 144 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 SPARCP09486 303 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 RAP2AP10114 183 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 FAHP16930 419 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 SPI1P17947 270 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 SLC15A1P46059 708 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 BMXP51813 675 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 IKZF1Q13422 519 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 SNAI3Q3KNW1 292 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 KLHL22Q53GT1 634 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 LYPD4Q6UWN0 246 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 RNF144BQ7Z419 303 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 GCSAMQ8N6F7 178 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 ZNF511Q8NB15 262 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 H1FXQ92522 213 aaKnown RBP12.87□□□□□ -0.35
DDX55-202ENST00000354291 SLAMF6Q96DU3 332 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 ASB9Q96DX5 294 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 C1orf21Q9H246 121 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 ZNF702PQ9H963 129 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 CENPMQ9NSP4 180 aa12.87□□□□□ -0.35
DDX55-202ENST00000354291 GAR1Q9NY12 217 aaKnown RBP12.87□□□□□ -0.35
DDX55-202ENST00000354291 MRPL15Q9P015 296 aaKnown RBP12.87□□□□□ -0.35
DDX55-202ENST00000354291 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
DDX55-202ENST00000354291 XRCC2O43543 280 aa12.86□□□□□ -0.35
DDX55-202ENST00000354291 NDUFB3O43676 98 aa12.86□□□□□ -0.35
DDX55-202ENST00000354291 CST1P01037 141 aa12.86□□□□□ -0.35
DDX55-202ENST00000354291 PF4P02776 101 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms