RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RAB3BP20337 219 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 BDKRB2P30411 391 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 OR10A3P58181 314 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 DMRTC1Q5HYR2 192 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 LYPD6Q86Y78 171 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 SLC25A46Q96AG3 418 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 TECTBQ96PL2 329 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 TPK1Q9H3S4 243 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 CISD1Q9NZ45 108 aaKnown RBP23.11■■□□□ 1.29
SSBP4-202ENST00000348495 MPC1Q9Y5U8 109 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 MEGF11A6BM72 1044 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 PDCD5O14737 125 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 CA6P23280 308 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 MMP15P51511 669 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 CNPY1Q3B7I2 92 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 Q6ZR03 302 aa23.11■■□□□ 1.29
SSBP4-202ENST00000348495 A1L4Q6 167 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 SMIM30A4D0T7 59 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 FAM221AA4D161 298 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 NCR1O76036 304 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 ALDOBP05062 364 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 PRF1P14222 555 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 ZNF182P17025 639 aaPredicted RBP23.1■■□□□ 1.29
SSBP4-202ENST00000348495 APOBEC3AP31941 199 aaPredicted RBP23.1■■□□□ 1.29
SSBP4-202ENST00000348495 EVX1P49640 407 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 SELENOVP59797 346 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 ZDHHC23Q8IYP9 409 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 NKAIN3Q8N8D7 197 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 DNAAF1Q8NEP3 725 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 OR52N4Q8NGI2 321 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 HPSE2Q8WWQ2 592 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 ITPKCQ96DU7 683 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 DHRS9Q9BPW9 319 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 PLK3Q9H4B4 646 aa23.1■■□□□ 1.29
SSBP4-202ENST00000348495 A0A1W2PPR1 153 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 VSTM5A8MXK1 200 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 SERPINF1P36955 418 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 CAV3P56539 151 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 CNN3Q15417 329 aaKnown RBP23.09■■□□□ 1.29
SSBP4-202ENST00000348495 PLCXD3Q63HM9 321 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 MOB3CQ70IA8 216 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 OR5P3Q8WZ94 311 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 SPSB1Q96BD6 273 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 DCUN1D5Q9BTE7 237 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 FGF23Q9GZV9 251 aaPredicted RBP23.09■■□□□ 1.29
SSBP4-202ENST00000348495 TMEM100Q9NV29 134 aa23.09■■□□□ 1.29
SSBP4-202ENST00000348495 ERCC1P07992 297 aaPredicted RBP23.08■■□□□ 1.29
SSBP4-202ENST00000348495 AZGP1P25311 298 aaKnown RBP23.08■■□□□ 1.29
SSBP4-202ENST00000348495 EFNB3Q15768 340 aa23.08■■□□□ 1.29
SSBP4-202ENST00000348495 CEACAM21Q3KPI0 293 aa23.08■■□□□ 1.29
SSBP4-202ENST00000348495 CRIP3Q6Q6R5 217 aa23.08■■□□□ 1.29
SSBP4-202ENST00000348495 DVL3Q92997 716 aaPredicted RBP23.08■■□□□ 1.29
SSBP4-202ENST00000348495 BARHL1Q9BZE3 327 aa23.08■■□□□ 1.29
SSBP4-202ENST00000348495 SLC22A4Q9H015 551 aa23.08■■□□□ 1.29
SSBP4-202ENST00000348495 ANXA2P2A6NMY6 339 aa23.08■■□□□ 1.28
SSBP4-202ENST00000348495 PRKACBP22694 351 aa23.08■■□□□ 1.28
SSBP4-202ENST00000348495 ABCB9Q9NP78 766 aa23.08■■□□□ 1.28
SSBP4-202ENST00000348495 TAAR3PQ9P1P4 343 aa23.08■■□□□ 1.28
SSBP4-202ENST00000348495 V9GY05 133 aa23.08■■□□□ 1.28
SSBP4-202ENST00000348495 NOTOA8MTQ0 251 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 MLNRO43193 412 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 PSMD7P51665 324 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 DDI2Q5TDH0 399 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 RNF144BQ7Z419 303 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 CDH26Q8IXH8 852 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 OR13G1Q8NGZ3 307 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 NPRL2Q8WTW4 380 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 MSL2Q9HCI7 577 aa23.07■■□□□ 1.28
SSBP4-202ENST00000348495 CCDC59Q9P031 241 aaKnown RBP23.07■■□□□ 1.28
SSBP4-202ENST00000348495 CGGBP1Q9UFW8 167 aaPredicted RBP23.07■■□□□ 1.28
SSBP4-202ENST00000348495 USP9YO00507 2555 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-202ENST00000348495 ZSCAN5BA6NJL1 495 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 CFPP27918 469 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 HNRNPA0Q13151 305 aaKnown RBP23.06■■□□□ 1.28
SSBP4-202ENST00000348495 MOGQ16653 247 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 MST1LQ2TV78 715 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 SP5Q6BEB4 398 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-202ENST00000348495 SFXN4Q6P4A7 337 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 GTF3AQ92664 365 aaKnown RBP23.06■■□□□ 1.28
SSBP4-202ENST00000348495 SLC7A11Q9UPY5 501 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 ICE1Q9Y2F5 2266 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 HRNRQ86YZ3 2850 aaPredicted RBP23.06■■□□□ 1.28
SSBP4-202ENST00000348495 PKDREJQ9NTG1 2253 aa23.06■■□□□ 1.28
SSBP4-202ENST00000348495 PQLC2LA1A4F0 135 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 H0YL77 283 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 HCKP08631 526 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 RORCP51449 518 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 FUT6P51993 359 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 GLT8D1Q68CQ7 371 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 OR5A2Q8NGI9 324 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 ADAT1Q9BUB4 502 aaKnown RBP23.05■■□□□ 1.28
SSBP4-202ENST00000348495 METTL17Q9H7H0 456 aaPredicted RBP23.05■■□□□ 1.28
SSBP4-202ENST00000348495 CYSLTR2Q9NS75 346 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 IGKV1-27A0A075B6S5 117 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 IFITM5A6NNB3 132 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 OCMP0CE72 109 aaPredicted RBP23.05■■□□□ 1.28
SSBP4-202ENST00000348495 TRMT10AQ8TBZ6 339 aaKnown RBP23.05■■□□□ 1.28
SSBP4-202ENST00000348495 SPACA5Q96QH8 159 aa23.05■■□□□ 1.28
SSBP4-202ENST00000348495 SLIRPQ9GZT3 109 aaKnown RBP23.05■■□□□ 1.28
SSBP4-202ENST00000348495 PLEKHB1Q9UF11 243 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms