RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 DNASE2O00115 360 aaPredicted RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 FABP1P07148 127 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 MSR1P21757 451 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SRPXP78539 464 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 FABP9Q0Z7S8 132 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 SEMA6DQ8NFY4 1073 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 GLYATL2Q8WU03 294 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 RRNAD1Q96FB5 475 aaKnown RBP11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 NRIP2Q9BQI9 281 aa11.35□□□□□ -0.59
DNMT3A-202ENST00000321117 COL4A4P53420 1690 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 TRAV14DV4A0A0A6YYC5 116 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 NPIPB9F8W1W9 429 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 RAB27BO00194 218 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 TNFSF12O43508 249 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 GUSBP08236 651 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 FAHP16930 419 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 NFYBP25208 207 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 NPBWR1P48145 328 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 ZNF260Q3ZCT1 412 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 FDX2Q6P4F2 183 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC22A25Q6T423 547 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 RXFP4Q8TDU9 374 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 ADAT3Q96EY9 351 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 CLCC1Q96S66 551 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 LMAN1LQ9HAT1 526 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 MRPL22Q9NWU5 206 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 PIGBOS1A0A0B4J2F0 54 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 CTSBP07858 339 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 HLA-DOBP13765 273 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 CSNK1EP49674 416 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 KISS1Q15726 138 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 PABPC1L2AQ5JQF8 200 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 C1orf100Q5SVJ3 147 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 PLXDC2Q6UX71 529 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 TMEM217Q8N7C4 229 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 SLC25A43Q8WUT9 341 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 KCNS2Q9ULS6 477 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 A0A1W2PQF6 199 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 RER1O15258 196 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 LINC01565O15544 149 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 EIF1P41567 113 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 ECH1Q13011 328 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 SP6Q3SY56 376 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 TMEM92Q6UXU6 159 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 LILRB2Q8N423 598 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 C15orf54Q8N8G6 183 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 CPNE4Q96A23 557 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 GFOD1Q9NXC2 390 aa11.34□□□□□ -0.59
DNMT3A-202ENST00000321117 TCF20Q9UGU0 1960 aaKnown RBP11.33□□□□□ -0.59
DNMT3A-202ENST00000321117 TTLL8A6PVC2 850 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 HBE1P02100 147 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 CD74P04233 296 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 NKX2-1P43699 371 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 HTR5AP47898 357 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 RPL23AP62750 156 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 RAB1AP62820 205 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 EGR4Q05215 589 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 C16orf47Q6ZP98 133 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 LANCL3Q6ZV70 420 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 NOXO1Q8NFA2 376 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 ASB10Q8WXI3 467 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 MRGPRX4Q96LA9 322 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 IGLV1-36A0A0B4J1U3 117 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 FAM221AA4D161 298 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 M0R135 149 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 PPP1R2P9O14990 202 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 SLC34A2O95436 690 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 H2AFB1P0C5Y9 115 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 GALNSP34059 522 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 SUMO3P55854 103 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 TMEM33P57088 247 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 MYBPHQ13203 477 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 RNF133Q8WVZ7 376 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 ZNF799Q96GE5 643 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 MYOZ1Q9NP98 299 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 ZMAT5Q9UDW3 170 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 A0A1W2PQD3 144 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 GJE1A6NN92 205 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 PTGFRP43088 359 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 TLE4Q04727 773 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 VN1R1Q9GZP7 353 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 ADAM19Q9H013 955 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 BCO1Q9HAY6 547 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
DNMT3A-202ENST00000321117 LMX1BO60663 402 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 SCRG1O75711 98 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 RD3LP0DJH9 198 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 NME1P15531 152 aaKnown RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 MUC1P15941 1255 aaPredicted RBP11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 OR51F2Q8NH61 342 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 OXGR1Q96P68 337 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 CFHR5Q9BXR6 569 aa11.32□□□□□ -0.6
DNMT3A-202ENST00000321117 LOC102725191A0A1B0GVB3 256 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms