RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 UCK2Q9BZX2 261 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CHRNA10Q9GZZ6 450 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 PIGUQ9H490 435 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 DUSP21Q9H596 190 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 FAM60AQ9NP50 221 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 IMPAD1Q9NX62 359 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 IL20Q9NYY1 176 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 TMEM9Q9P0T7 183 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MDFICQ9P1T7 246 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 MEMO1Q9Y316 297 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 WDR45Q9Y484 360 aa3.19□□□□□ -1.9
SMCO3-201ENST00000316048 CHD7Q9P2D1 2997 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 MYO10Q9HD67 2058 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 IGHV3OR16-12A0A075B7B8 117 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TLCD2A6NGC4 264 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF860A6NHJ4 632 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF99A8MXY4 864 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ARPC3O15145 178 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 NUDT21O43809 227 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 NSA2O95478 260 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DBIP07108 87 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF3P17036 446 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DCKP27707 260 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 LAP3P28838 519 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 FMO3P31513 532 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 IDH2P48735 452 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ARRB1P49407 418 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 UGT2B15P54855 530 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TMBIM6P55061 237 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TAS2R41P59536 307 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DYNC1I2Q13409 638 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ILKQ13418 452 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DGCR6Q14129 220 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TRAM2Q15035 370 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 PTGES3Q15185 160 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNHIT3Q15649 155 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 LTB4RQ15722 352 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DEFB133Q30KQ1 61 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TRMT12Q53H54 448 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 EIPR1Q53HC9 387 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 NHLRC3Q5JS37 347 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 FAM120AOSQ5T036 256 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 GPR107Q5VW38 600 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 MLIPQ5VWP3 458 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF57Q68EA5 555 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF343Q6P1L6 599 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DHRS4L2Q6PKH6 230 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 CASP12Q6UXS9 341 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 UBQLNLQ8IYU4 475 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 COX18Q8N8Q8 333 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 OR7G2Q8NG99 324 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 GPR32P1Q8NGA4 272 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 OR9A4Q8NGU2 314 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 RHOXF1Q8NHV9 184 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF675Q8TD23 568 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 GPR151Q8TDV0 419 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TRUB1Q8WWH5 349 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 RORBQ92753 470 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 PELI1Q96FA3 418 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 PRRC1Q96M27 445 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ZNF578Q96N58 590 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TGM7Q96PF1 710 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 SDF2Q99470 211 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 NIPSNAP1Q9BPW8 284 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TM2D1Q9BX74 207 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 POLR2J3Q9H1A7 115 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 SLC38A1Q9H2H9 487 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ANKRD19PQ9H560 264 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 FANCEQ9HB96 536 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 ADAP2Q9NPF8 381 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 PRTFDC1Q9NRG1 225 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 CLN6Q9NWW5 311 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 WARS2Q9UGM6 360 aaKnown RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 KCNE3Q9Y6H6 103 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 SLCO1B1Q9Y6L6 691 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 PLXND1Q9Y4D7 1925 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 NUP214P35658 2090 aaPredicted RBP3.18□□□□□ -1.9
SMCO3-201ENST00000316048 HEATR5BQ9P2D3 2071 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 FANCMQ8IYD8 2048 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 DSPPQ9NZW4 1301 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 LRP4O75096 1905 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 TRANK1O15050 2925 aa3.18□□□□□ -1.9
SMCO3-201ENST00000316048 SNTNA6NMZ2 147 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 E9PQ18 207 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 G3V4G9 280 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 H3BN98 237 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 FFAR1O14842 300 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 FCMRO60667 390 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 DNAJB6O75190 326 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RDH16O75452 317 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RENP00797 406 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 HPGDP15428 266 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 TBXA2RP21731 343 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 HOXA6P31267 233 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 GABRA3P34903 492 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 RGS8P57771 180 aaPredicted RBP3.17□□□□□ -1.9
SMCO3-201ENST00000316048 PPP1CAP62136 330 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 SLC35A2P78381 396 aa3.17□□□□□ -1.9
SMCO3-201ENST00000316048 EMX1Q04741 257 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms