RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gdf1P20863 357 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rac3P60764 192 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fabp5Q05816 135 aaKnown RBP13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tmem171Q4KL18 322 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1028Q7TR89 324 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rrnad1Q8BZG5 475 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 PhyhipQ8K0S0 330 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nkd2Q8VE28 461 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 GpnmbQ99P91 574 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tex33Q9D9J2 266 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Syt13Q9EQT6 426 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Eif2s3yQ9Z0N2 472 aa13.08□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr520E9Q518 316 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Selenbp1P17563 472 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tmprss11bQ14C59 416 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Adam5Q3TTE0 751 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ranbp3lQ6PDH4 491 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 2210407C18RikQ6YI28 220 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Marveld1Q7TQJ1 173 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fbxo5Q7TSG3 421 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fam98bQ80VD1 429 aaKnown RBP13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Adam30Q811Q3 732 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fam180aQ8BR21 173 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nsun3Q8CCT7 348 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Fam199xQ8K2D0 388 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 FRRS1Q8K385 592 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tmem234Q8R1E7 140 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tnk1Q99ML2 666 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Cela3bQ9CQ52 269 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Dusp3Q9D7X3 185 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Pard6gQ9JK84 382 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 SetxA2AKX3 2646 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ighv1-24A0A0A6YY24 117 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr1156A2AVC3 323 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm15737D3YZR0 106 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Igfbp3P47878 292 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rfx3P48381 749 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nos3P70313 1202 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nufip2Q5F2E7 692 aaKnown RBP13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr446Q8VEV0 308 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Hspb2Q99PR8 182 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Uqcrc1Q9CZ13 480 aaKnown RBP13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rtl8cQ9D6I0 112 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Alg5Q9DB25 324 aa13.07□□□□□ -0.32
Nup88-202ENSMUST00000108530 Arfgef3Q3UGY8 2170 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Dcst2A0A140LIJ0 701 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm14409A2ARR8 349 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ccdc9bA3KGF9 545 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm3033M0QWI0 180 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 H2-K1P01901 369 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 KitlgP20826 273 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Rab2bP59279 216 aaKnown RBP13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Taf13P61216 124 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Acp5Q05117 327 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Thsd4Q3UTY6 1018 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ppp5cQ60676 499 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Crispld2Q8BZQ2 495 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Pla2g3Q8BZT7 504 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Dnajc22Q8CHS2 339 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Phospho1Q8R2H9 267 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr518Q8VEW1 333 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nudt16l1Q8VHN8 211 aaKnown RBP13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Bcdin3dQ91YP1 285 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Sfxn5Q925N0 342 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Pfdn1Q9CWM4 122 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Znf319Q9ERR8 581 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Galnt16Q9JJ61 558 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Serinc3Q9QZI9 472 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm21149A0A0G2JFY7 255 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm14744B1AVU4 173 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn2r41E9Q5C7 852 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn2r40F6W043 852 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Nipsnap1O55125 284 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Klk1b3P00756 261 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Macrod2Q3UYG8 475 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr107Q7TRK4 309 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Klhl24Q8BRG6 600 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 NdnfQ8C119 568 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Mettl21eQ8CDZ2 244 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Klk14Q8CGR5 250 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn1r183Q8K3N5 305 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 C8gQ8VCG4 202 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Mrgpra6Q91ZC6 301 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Ear6Q923L7 155 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 5430402E10RikQ9D3N5 173 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Hoga1Q9DCU9 321 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tnfrsf19Q9JLL3 416 aa13.06□□□□□ -0.32
Nup88-202ENSMUST00000108530 Spaca5A2AE20 160 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Olfr550E9Q544 316 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Vmn2r48E9Q5D8 855 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm20683H3BKJ1 410 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Gm17026K7N6Z0 213 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 C3ar1O09047 477 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 DdostO54734 441 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 NlkO54949 527 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Tesk1O70146 627 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Stmn3O70166 180 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Igh-VJ558P01758 117 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Dok1P97465 482 aa13.05□□□□□ -0.32
Nup88-202ENSMUST00000108530 Slc38a8Q5HZH7 432 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 86.4 ms