RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 SNAI3Q3KNW1 292 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 SFRP5Q5T4F7 317 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 DNM1P46Q6ZS02 220 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 GDPD3Q7L5L3 318 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 ANGPTL5Q86XS5 388 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 SNX29P2Q8IUI4 249 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 GABRG1Q8N1C3 465 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 OR52N4Q8NGI2 321 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 OR5M9Q8NGP3 310 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 SSC4DQ8WTU2 575 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 YIPF5Q969M3 257 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 MRPS24Q96EL2 167 aaKnown RBP8.45□□□□□ -1.06
PHGDH-215ENST00000641371 REPIN1Q9BWE0 567 aaKnown RBP8.45□□□□□ -1.06
PHGDH-215ENST00000641371 ACTR6Q9GZN1 396 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 ATG5Q9H1Y0 275 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 CDH20Q9HBT6 801 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 CGGBP1Q9UFW8 167 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-215ENST00000641371 RBMX2Q9Y388 322 aaKnown RBP8.45□□□□□ -1.06
PHGDH-215ENST00000641371 CACNG2Q9Y698 323 aa8.45□□□□□ -1.06
PHGDH-215ENST00000641371 FUOMA2VDF0 154 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 C5orf49A4QMS7 147 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM14DPA8MWL7 114 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 MSTNO14793 375 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 TPD52L2O43399 206 aaKnown RBP8.44□□□□□ -1.06
PHGDH-215ENST00000641371 ORC5O43913 435 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 CST4P01036 141 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 NRASP01111 189 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 GSTP1P09211 210 aaKnown RBP8.44□□□□□ -1.06
PHGDH-215ENST00000641371 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 NAT2P11245 290 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 CEACAM8P31997 349 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-215ENST00000641371 PRSS3P35030 304 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 GDNFP39905 211 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 ID4P47928 161 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 PTH2RP49190 550 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 RBP2P50120 134 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 ATP1B3P54709 279 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 FAM3AP98173 230 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 PPA1Q15181 289 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 KISS1Q15726 138 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 C9orf135Q5VTT2 229 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 CD163Q86VB7 1156 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF101Q8IZC7 436 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 ZSCAN4Q8NAM6 433 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-215ENST00000641371 CPEB3Q8NE35 698 aaKnown RBP8.44□□□□□ -1.06
PHGDH-215ENST00000641371 SLC30A7Q8NEW0 376 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 OR56B1Q8NGI3 324 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 OR4D6Q8NGJ1 314 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 FGFBP3Q8TAT2 258 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 CHAC2Q8WUX2 184 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 SLC7A6Q92536 515 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 CREB3L1Q96BA8 519 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 BORCS8Q96FH0 119 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 SLX1AQ9BQ83 275 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 C11orf54Q9H0W9 315 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-215ENST00000641371 OR10A4Q9H209 315 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 DPAGT1Q9H3H5 408 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 RHBDD3Q9Y3P4 386 aa8.44□□□□□ -1.06
PHGDH-215ENST00000641371 LOC100509620A0A075B734 347 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 A0A1B0GVG6 124 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 H7C417 338 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 PLA2G10O15496 165 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 GMDSO60547 372 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 LMX1BO60663 402 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 CA11O75493 328 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 TNFSF13O75888 250 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 KDM4BO94953 1096 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 CGAP01215 116 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 IGKV3-15P01624 115 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 LPLP06858 475 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 MELTFP08582 738 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 PATE4P0C8F1 98 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 FAHP16930 419 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF14P17017 642 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-215ENST00000641371 TBPP20226 339 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 CPT2P23786 658 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 PTGFRP43088 359 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 CBX5P45973 191 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 TDGF1P3P51864 188 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 BTG1P62324 171 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 QRFPP83859 136 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 ZNF92Q03936 586 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 PMPCAQ10713 525 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 SNTB2Q13425 540 aaKnown RBP8.43□□□□□ -1.06
PHGDH-215ENST00000641371 PNLIPRP3Q17RR3 467 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM211Q6ICI0 200 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 GLIPR1L1Q6UWM5 242 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 NRARPQ7Z6K4 114 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 NAA40Q86UY6 237 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 MDP1Q86V88 176 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 SAXO1Q8IYX7 474 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 GCNT2Q8N0V5 402 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 PXT1Q8NFP0 134 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 EXTL1Q92935 676 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 STARD4Q96DR4 205 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 HIST1H2AAQ96QV6 131 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 TMEM59Q9BXS4 323 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 METTL9Q9H1A3 318 aa8.43□□□□□ -1.06
PHGDH-215ENST00000641371 RHOFQ9HBH0 211 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms