RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 MAGEB4O15481 346 aaPredicted RBP13.57□□□□□ -0.24
COLCA2-207ENST00000639470 FSTL3O95633 263 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 LHBP01229 141 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 LYNP07948 512 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 AMY2BP19961 511 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 PRTN3P24158 256 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 SLC15A1P46059 708 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 RPS7P62081 194 aaKnown RBP13.57□□□□□ -0.24
COLCA2-207ENST00000639470 SLC9A3R2Q15599 337 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 WDR82Q6UXN9 313 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 PDZD9Q8IXQ8 264 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 FAM216BQ8N7L0 139 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 C3orf56Q8N813 242 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 PAPD5Q8NDF8 572 aaKnown RBP13.57□□□□□ -0.24
COLCA2-207ENST00000639470 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 OR5T2Q8NGG2 359 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 RPL3LQ92901 407 aaKnown RBP13.57□□□□□ -0.24
COLCA2-207ENST00000639470 SLC22A4Q9H015 551 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 WDR13Q9H1Z4 485 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 TVP23BQ9NYZ1 205 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 DNAJB9Q9UBS3 223 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 LRP12Q9Y561 859 aa13.57□□□□□ -0.24
COLCA2-207ENST00000639470 ZNF850A8MQ14 1090 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 DVL1O14640 695 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 PRKYO43930 277 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 DNAJC8O75937 253 aaPredicted RBP13.56□□□□□ -0.24
COLCA2-207ENST00000639470 MMP9P14780 707 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 PAICSP22234 425 aaKnown RBP13.56□□□□□ -0.24
COLCA2-207ENST00000639470 OMGP23515 440 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 CFHR2P36980 270 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 BLVRAP53004 296 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 DNAL1Q4LDG9 190 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 RBMS3Q6XE24 437 aaKnown RBP13.56□□□□□ -0.24
COLCA2-207ENST00000639470 SHFQ7M4L6 423 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 HPSE2Q8WWQ2 592 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 OR10A2Q9H208 303 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 TOR3AQ9H497 397 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 SLC25A19Q9HC21 320 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 SNTG1Q9NSN8 517 aa13.56□□□□□ -0.24
COLCA2-207ENST00000639470 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.55□□□□□ -0.24
COLCA2-207ENST00000639470 CDIPTO14735 213 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 GSC2O15499 205 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 ALOX5APP20292 161 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 MFGE8Q08431 387 aaPredicted RBP13.55□□□□□ -0.24
COLCA2-207ENST00000639470 PRDX4Q13162 271 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 WDR38Q5JTN6 314 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 FAHD1Q6P587 224 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 ST8SIA4Q92187 359 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 UTP4Q969X6 686 aaKnown RBP13.55□□□□□ -0.24
COLCA2-207ENST00000639470 ITPKCQ96DU7 683 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 OPA3Q9H6K4 179 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 ZNF556Q9HAH1 456 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 DNAJB11Q9UBS4 358 aa13.55□□□□□ -0.24
COLCA2-207ENST00000639470 TRAV38-1A0A0B4J264 116 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 TMPRSS2O15393 492 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 HOXA3O43365 443 aaPredicted RBP13.54□□□□□ -0.24
COLCA2-207ENST00000639470 ENSAO43768 121 aaKnown RBP13.54□□□□□ -0.24
COLCA2-207ENST00000639470 HKR1P10072 659 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 ANXA8P13928 327 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 DDOSTP39656 456 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 CRISP1P54107 249 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 PSMA6P60900 246 aaKnown RBP13.54□□□□□ -0.24
COLCA2-207ENST00000639470 ARF6P62330 175 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 GK3PQ14409 553 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 SNAPC1Q16533 368 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 TEX36Q5VZQ5 186 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 PLEKHG7Q6ZR37 379 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 BTN2A1Q7KYR7 527 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 AMIGO2Q86SJ2 522 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.54□□□□□ -0.24
COLCA2-207ENST00000639470 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 PIGCQ92535 297 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 PKP2Q99959 881 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 SIRPDQ9H106 197 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 PAPOLBQ9NRJ5 636 aaKnown RBP13.54□□□□□ -0.24
COLCA2-207ENST00000639470 C14orf119Q9NWQ9 140 aa13.54□□□□□ -0.24
COLCA2-207ENST00000639470 NOP16Q9Y3C1 178 aaKnown RBP13.54□□□□□ -0.24
COLCA2-207ENST00000639470 CENPVL3A0A0U1RRI6 287 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 ZNF879B4DU55 563 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 PRODHO43272 600 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 AKR7A2O43488 359 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 RHBDL1O75783 438 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 TOX4O94842 621 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 HMGN1P05114 100 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 IKZF1Q13422 519 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 C9orf139Q6ZV77 190 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 SPERTQ8NA61 448 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 OR52H1Q8NGJ2 320 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 OR5P3Q8WZ94 311 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 TEAD3Q99594 435 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 SEMA6AQ9H2E6 1030 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 ELL3Q9HB65 397 aaPredicted RBP13.53□□□□□ -0.24
COLCA2-207ENST00000639470 FAM206AQ9NX38 181 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 KIF17Q9P2E2 1029 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 LAMP5Q9UJQ1 280 aa13.53□□□□□ -0.24
COLCA2-207ENST00000639470 RNASE1P07998 156 aaKnown RBP13.52□□□□□ -0.25
COLCA2-207ENST00000639470 PPIAL4GP0DN37 164 aa13.52□□□□□ -0.25
COLCA2-207ENST00000639470 POLR2IP36954 125 aaKnown RBP13.52□□□□□ -0.25
COLCA2-207ENST00000639470 GNALP38405 381 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms