RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 PLPP7Q8NBV4 271 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 FNDC8Q8TC99 324 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 SLC7A6OSQ96CW6 309 aaPredicted RBP11.17□□□□□ -0.62
SNX1-214ENST00000625244 PYURFQ96I23 114 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 PRRC1Q96M27 445 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 TCF19Q9Y242 345 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 V9GYQ6 96 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 DNAH10Q8IVF4 4471 aa11.17□□□□□ -0.62
SNX1-214ENST00000625244 M0R1W7 72 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 ACOT8O14734 319 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 RER1O15258 196 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 NDUFB3O43676 98 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 OR5F1O95221 314 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 GRPP07492 148 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 AMY2BP19961 511 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 ST3GAL3Q11203 375 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 TRAP1Q12931 704 aaKnown RBP11.16□□□□□ -0.62
SNX1-214ENST00000625244 AQP6Q13520 282 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 ALG10Q5BKT4 473 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 LCN8Q6JVE9 175 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 UNQ9370/PRO34162Q6UXP9 181 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 CYP2R1Q6VVX0 501 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 ETV3LQ6ZN32 361 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 ACOT11Q8WXI4 607 aaPredicted RBP11.16□□□□□ -0.62
SNX1-214ENST00000625244 H1FXQ92522 213 aaKnown RBP11.16□□□□□ -0.62
SNX1-214ENST00000625244 SEH1LQ96EE3 360 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 SGTBQ96EQ0 304 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 PRR25Q96S07 402 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 ADAT1Q9BUB4 502 aaKnown RBP11.16□□□□□ -0.62
SNX1-214ENST00000625244 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
SNX1-214ENST00000625244 hCG_1807616A0A1W2PRN6 198 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 RBMY1BA6NDE4 496 aaKnown RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 A6NDX4 124 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 RBMY1EA6NEQ0 496 aaKnown RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 NKX6-3A6NJ46 265 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 A6NLC8 198 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 GSC2O15499 205 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 CIB2O75838 187 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 RBMY1DP0C7P1 496 aaKnown RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 ECH1Q13011 328 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 FLOT2Q14254 428 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 PCK2Q16822 640 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 MICBQ29980 383 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 RSPO1Q2MKA7 263 aaPredicted RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 FAM98BQ52LJ0 330 aaKnown RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 PLA1AQ53H76 456 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 COLCA1Q6ZS62 124 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 RRM2BQ7LG56 351 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 SPRYD4Q8WW59 207 aaPredicted RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 SLCO4A1Q96BD0 722 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 RBMXL1Q96E39 390 aaKnown RBP11.15□□□□□ -0.62
SNX1-214ENST00000625244 RIMS3Q9UJD0 308 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.62
SNX1-214ENST00000625244 VGLL3A8MV65 326 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 F2RL2O00254 374 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 FABP3P05413 133 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 MUC1P15941 1255 aaPredicted RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 HOXB6P17509 224 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 ATP6V1B2P21281 511 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 CHATP28329 748 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 RBM34P42696 430 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 YAP1P46937 504 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 TGM4P49221 684 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 SMIM11AP58511 58 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 PIN1Q13526 163 aaPredicted RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 SLC36A1Q7Z2H8 476 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 NKAIN4Q8IVV8 208 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 DYNAPQ8N1N2 210 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 TMEM255BQ8WV15 326 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 DUS3LQ96G46 650 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 MCRIP2Q9BUT9 160 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 CADM1Q9BY67 442 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 KRCC1Q9NPI7 259 aaPredicted RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
SNX1-214ENST00000625244 ATPIF1Q9UII2 106 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 AURKCQ9UQB9 309 aa11.14□□□□□ -0.63
SNX1-214ENST00000625244 AQP12BA6NM10 295 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.13□□□□□ -0.63
SNX1-214ENST00000625244 GMDSO60547 372 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 RAMP3O60896 148 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 IGF2P01344 180 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 RHCEP18577 417 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 PAICSP22234 425 aaKnown RBP11.13□□□□□ -0.63
SNX1-214ENST00000625244 CTXN1P60606 82 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 GABPB1Q06547 395 aaPredicted RBP11.13□□□□□ -0.63
SNX1-214ENST00000625244 TRAM2Q15035 370 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 LRRC10Q5BKY1 277 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 C10orf99Q6UWK7 81 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 SPATA24Q86W54 205 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 ZDHHC21Q8IVQ6 265 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 AQP12AQ8IXF9 295 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 OFCC1Q8IZS5 231 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 LRRC75AQ8NAA5 344 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 SLC22A4Q9H015 551 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 MAGIXQ9H6Y5 334 aa11.13□□□□□ -0.63
SNX1-214ENST00000625244 HIF3AQ9Y2N7 669 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms