RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 DIMT1Q9UNQ2 313 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 YARS2Q9Y2Z4 477 aaKnown RBP4.05□□□□□ -1.76
VPS29-212ENST00000621131 SCN2AQ99250 2005 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 SPG11Q96JI7 2443 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 OTOGQ6ZRI0 2925 aa4.05□□□□□ -1.76
VPS29-212ENST00000621131 CCDC88CQ9P219 2028 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 BSNQ9UPA5 3926 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 A0A087WZY1 265 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 TMED7-TICAM2A0A0A6YYA0 188 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 A0A1W2PRG6 482 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 DAPL1A0PJW8 107 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 GJE1A6NN92 205 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 H3BMQ9 156 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 M0R129 80 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 CCRL2O00421 344 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 CDX4O14627 284 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 ZNF208O43345 1280 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 AIREO43918 545 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PRKYO43930 277 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 GMFGO60234 142 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FADS1O60427 444 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 OR2J2O76002 312 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 THY1P04216 161 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 P04436 131 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 HTR1AP08908 422 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ADORA3P0DMS8 318 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 VPREB1P12018 145 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 COX6A1P12074 109 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 CD36P16671 472 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PTNP21246 168 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PCMT1P22061 227 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 HTR1FP30939 366 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 SOX6P35712 828 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 DLSTP36957 453 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PEX19P40855 299 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 EIF1P41567 113 aaKnown RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 MAP2K4P45985 399 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 WNT4P56705 351 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 CLDN6P56747 220 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FBXW4P57775 412 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 TAS2R43P59537 309 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 LY6DQ14210 128 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 QPRTQ15274 297 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ZNF74Q16587 644 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 NTRK2Q16620 822 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 NDUFAF6Q330K2 333 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 KLHL12Q53G59 568 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ARMCX4Q5H9R4 360 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 SLC35D3Q5M8T2 416 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 SYT6Q5T7P8 510 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 C1orf140Q5VVS0 124 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FAM205BPQ63HN1 556 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 GPR139Q6DWJ6 353 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 XAF1Q6GPH4 301 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 DHRS7BQ6IAN0 325 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 ACSM5Q6NUN0 579 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ZNF544Q6NX49 715 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FAM199XQ6PEV8 388 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 WDR88Q6ZMY6 472 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 GLRX5Q86SX6 157 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 RTN4RL2Q86UN3 420 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 LINC00612Q8N6U2 182 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 POMGNT2Q8NAT1 580 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 DEFB124Q8NES8 71 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PROKR2Q8NFJ6 384 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 OR8D4Q8NGM9 314 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 OR4Q3Q8NH05 313 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 OR6S1Q8NH40 331 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 OR51A7Q8NH64 312 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 HAVCR2Q8TDQ0 301 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 CT55Q8WUE5 264 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 UFD1Q92890 307 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 HGDQ93099 445 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 TMIGD2Q96BF3 282 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 C8orf44Q96CB5 159 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ZHX1-C8orf76Q96EF9 292 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ERMAPQ96PL5 475 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 RASL10BQ96S79 203 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 SOSTQ9BQB4 213 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 ZNF426Q9BUY5 554 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FUNDC2Q9BWH2 189 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PLA2G12AQ9BZM1 189 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 GPN2Q9H9Y4 310 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 ZNF160Q9HCG1 818 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 AMBNQ9NP70 447 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FGF20Q9NP95 211 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 ISYNA1Q9NPH2 558 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 INIPQ9NRY2 104 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PAK1IP1Q9NWT1 392 aaPredicted RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 ENPP5Q9UJA9 477 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 DKKL1Q9UK85 242 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 MOKQ9UQ07 419 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 FARSAQ9Y285 508 aaKnown RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 SIGLEC7Q9Y286 467 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 TMED7Q9Y3B3 224 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 WIF1Q9Y5W5 379 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 SPENQ96T58 3664 aaKnown RBP4.04□□□□□ -1.76
VPS29-212ENST00000621131 CRYBG3Q68DQ2 2970 aa4.04□□□□□ -1.76
VPS29-212ENST00000621131 PDZD2O15018 2839 aa4.03□□□□□ -1.76
VPS29-212ENST00000621131 AKAP9Q99996 3911 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms