RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 SP4Q02446 784 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 MAD2L1BPQ15013 274 aaPredicted RBP2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 ANGPT1Q15389 498 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 MLIPQ5VWP3 458 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 SLC8B1Q6J4K2 584 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM136Q6ZRR5 245 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 ERO1BQ86YB8 467 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 MICU2Q8IYU8 434 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 OR4M1Q8NGD0 313 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 NDNFQ8TB73 568 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 LRRC20Q8TCA0 184 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 CCDC12Q8WUD4 166 aaPredicted RBP2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 RAB1CQ92928 201 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 SLC38A4Q969I6 547 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 TOP1MTQ969P6 601 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 SHANK2-AS3Q9BTD1 123 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 GAL3ST2Q9H3Q3 398 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 ELOVL6Q9H5J4 265 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 PARVGQ9HBI0 331 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 TMEM27Q9HBJ8 222 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 CCNB1IP1Q9NPC3 277 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 MED4Q9NPJ6 270 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 C20orf96Q9NUD7 363 aaPredicted RBP2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 CHMP5Q9NZZ3 219 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 STX18Q9P2W9 335 aaKnown RBP2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 MMACHCQ9Y4U1 282 aa2.09□□□□□ -2.07
SCAMP1-205ENST00000614488 UNC13AQ9UPW8 1703 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 ITGB4P16144 1822 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 IGHV1-69DA0A0B4J2H0 117 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 A0A0J9YYE9 177 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 PDZK1P1A8MUH7 402 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 NDUFC2-KCTD14E9PQ53 114 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 SCAMP2O15127 329 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 RAD51CO43502 376 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 OR2J3O76001 311 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 AQP8O94778 261 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 IGLV6-57P01721 117 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 TRBC1P01850 177 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 SERPINE2P07093 398 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 GTF2E2P29084 291 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 MPV17P39210 176 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 SLC1A1P43005 524 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 UQCRFS1P47985 274 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 MYL6P60660 151 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 YWHAEP62258 255 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 TNNC1P63316 161 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 CTAG1AP78358 180 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 SIGLEC14Q08ET2 396 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 ITIH4Q14624 930 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 PPM1LQ5SGD2 360 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 C9orf135Q5VTT2 229 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 TWF2Q6IBS0 349 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 NDUFAF7Q7L592 441 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 SSX9Q7RTT3 188 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 MRPL55Q7Z7F7 128 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 NT5DC3Q86UY8 548 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 GABRG1Q8N1C3 465 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 PQLC3Q8N755 202 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 PROKR2Q8NFJ6 384 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 OR4C5Q8NGB2 326 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 PDCD6IPQ8WUM4 868 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 EEF1AKMT3Q96AZ1 226 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 COL21A1Q96P44 957 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 TGS1Q96RS0 853 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 KCNS3Q9BQ31 491 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 HINT2Q9BX68 163 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 IL22Q9GZX6 179 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 MRPS30Q9NP92 439 aaKnown RBP2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 CD300AQ9UGN4 299 aa2.08□□□□□ -2.08
SCAMP1-205ENST00000614488 SMCO2A6NFE2 343 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 NCBP2LA6PVI3 153 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 IQCF5A8MTL0 148 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 K7EMT4 169 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 CLOCKO15516 846 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 KDELR3O43731 214 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 NIPSNAP2O75323 286 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 NDUFS6O75380 124 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 OR2F2O95006 317 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 SCELO95171 688 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 SNAI1O95863 264 aaPredicted RBP2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 ZNF24P17028 368 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 SLC1A2P43004 574 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 FAM53BQ14153 422 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 SCD5Q86SK9 330 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 SELENOHQ8IZQ5 122 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 FAM58AQ8N1B3 248 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 OR7G2Q8NG99 324 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 OR5T3Q8NGG3 340 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 OR1J4Q8NGS1 313 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 ACMSDQ8TDX5 336 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 APH1BQ8WW43 257 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 CACNG8Q8WXS5 425 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 C8orf76Q96K31 380 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 ZFP3Q96NJ6 502 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 ACBD6Q9BR61 282 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 NEUROG2Q9H2A3 272 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 CCDC59Q9P031 241 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 RBMX2Q9Y388 322 aaKnown RBP2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 MYO3BQ8WXR4 1341 aa2.07□□□□□ -2.08
SCAMP1-205ENST00000614488 ZSWIM8A7E2V4 1837 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 260.1 ms