RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TBX1O43435 398 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 CCNB2O95067 398 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 RPS27P42677 84 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 ACSM1Q08AH1 577 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 DHRS7BQ6IAN0 325 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 WDR82Q6UXN9 313 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 VMO1Q7Z5L0 202 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 C1QL4Q86Z23 238 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 C8orf46Q8TAG6 207 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 REEP6Q96HR9 211 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 CDRT15Q96T59 188 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 CCL13Q99616 98 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 PKP2Q99959 881 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 TSSK6Q9BXA6 273 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNF391Q9UJN7 358 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 VPREB3Q9UKI3 123 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 N6AMT1Q9Y5N5 214 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 LYVE1Q9Y5Y7 322 aa14.67□□□□□ -0.06
SHKBP1-227ENST00000602011 DHRS12A0PJE2 317 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 C5orf63A6NC05 138 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 TMEM210A6NLX4 147 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 GASTP01350 101 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 ANXA2P07355 339 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 SLC2A1P11166 492 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 SPI1P17947 270 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 CX3CR1P49238 355 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 MNAT1P51948 309 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 BLMHQ13867 455 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 GK3PQ14409 553 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 WDR38Q5JTN6 314 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 NCR3LG1Q68D85 454 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNF770Q6IQ21 691 aaPredicted RBP14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 C11orf88Q6PI97 169 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 C16orf89Q6UX73 402 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 PIP4P2Q8N4L2 257 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNF511Q8NB15 262 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 OR51L1Q8NGJ5 315 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 RNF133Q8WVZ7 376 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 DCTN5Q9BTE1 182 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 TBC1D23Q9NUY8 699 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 HAO2Q9NYQ3 351 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNRD1Q9P1U0 126 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 ONECUT1Q9UBC0 465 aa14.66□□□□□ -0.06
SHKBP1-227ENST00000602011 hCG_38984A0A1B0GV85 526 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 RIIAD1A6NNX1 92 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNF3P17036 446 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 MAGEA2P43356 314 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 GSK3AP49840 483 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 HOXA4Q00056 320 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 CRMP1Q14194 572 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 C2orf68Q2NKX9 166 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 FAM76BQ5HYJ3 339 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 Q6ZSV7 163 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 CPLX4Q7Z7G2 160 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 PAPD5Q8NDF8 572 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 OR9Q1Q8NGQ5 310 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 OR6K6Q8NGW6 343 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 ZNRF4Q8WWF5 429 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 BTBD10Q9BSF8 475 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 RTL8AQ9BWD3 113 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 DGCR6LQ9BY27 220 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 FAM234AQ9H0X4 552 aa14.65□□□□□ -0.06
SHKBP1-227ENST00000602011 IGHV3OR15-7A0A075B7D8 119 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 M0R1W7 72 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 CDIPTO14735 213 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 PAHP00439 452 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 UBE2E1P51965 193 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 DBPQ10586 325 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 EIF2B1Q14232 305 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 CD300LDQ6UXZ3 194 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 PRSS45Q7RTY3 260 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 HIST1H2AAQ96QV6 131 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 INTS14Q96SY0 518 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 PAPOLGQ9BWT3 736 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 MAGIXQ9H6Y5 334 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 METTL8Q9H825 291 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 CMC2Q9NRP2 79 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 ACTR3BQ9P1U1 418 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 DNAJB11Q9UBS4 358 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 FBLN5Q9UBX5 448 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 TAGLN3Q9UI15 199 aa14.64□□□□□ -0.07
SHKBP1-227ENST00000602011 NKX6-3A6NJ46 265 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 NPFFO15130 113 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 SNX3O60493 162 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 FCN3O75636 299 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 CST4P01036 141 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 GSTT1P30711 240 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 CAV3P56539 151 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 POU4F2Q12837 409 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 MICAQ29983 383 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 LINC01590Q5TEZ4 76 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 STUMQ69YW2 141 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 ARHGAP24Q8N264 748 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 ZNF454Q8N9F8 522 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 AQP11Q8NBQ7 271 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 OR9Q2Q8NGE9 314 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 OR5D13Q8NGL4 314 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 OR8D4Q8NGM9 314 aa14.63□□□□□ -0.07
SHKBP1-227ENST00000602011 ITPKCQ96DU7 683 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms