RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C8orf4Q9NR00 106 aa14.68□□□□□ -0.06
SHKBP1-203ENST00000594298 ACOD1A6NK06 481 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 SNTNA6NMZ2 147 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF670-ZNF695F2Z2N8 137 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 FSTL3O95633 263 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 CD80P33681 288 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 ATP6V1E1P36543 226 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 MTNR1AP48039 350 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 SRP9P49458 86 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF121P58317 390 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF92Q03936 586 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC9A3R2Q15599 337 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 GLYATL3Q5SZD4 288 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 MEDAGQ5VYS4 303 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 LRRN1Q6UXK5 716 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 FAM57BQ71RH2 274 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC35F2Q8IXU6 374 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 DACT3Q96B18 629 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 UPRTQ96BW1 309 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 SSBP3Q9BWW4 388 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 DNAJC27Q9NZQ0 273 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 GMPPBQ9Y5P6 360 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 WNK2Q9Y3S1 2297 aa14.67□□□□□ -0.06
SHKBP1-203ENST00000594298 ARHGAP32A7KAX9 2087 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 CD300LBA8K4G0 201 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 PLATP00750 562 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 DCTDP32321 178 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 HCCSP53701 268 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 SNCBQ16143 134 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF181Q2M3W8 571 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC25A30Q5SVS4 291 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 BTNL3Q6UXE8 466 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF679Q8IYX0 411 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 BHLHE23Q8NDY6 225 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 OR2AE1Q8NHA4 323 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 SPSB4Q96A44 273 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 RDH12Q96NR8 316 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 SLC29A1Q99808 456 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 SLITRK2Q9H156 845 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 ADGRL4Q9HBW9 690 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 TMEM165Q9HC07 324 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 BRD7Q9NPI1 651 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 CLN6Q9NWW5 311 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF391Q9UJN7 358 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 IKZF2Q9UKS7 526 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 KLHDC2Q9Y2U9 406 aa14.66□□□□□ -0.06
SHKBP1-203ENST00000594298 MPZL2O60487 215 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 GMDSO60547 372 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 IGHV4-38-2P0DP08 117 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 RIDAP52758 137 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 PSMA6P60900 246 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 SNRPGP62308 76 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 ROM1Q03395 351 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 MZT1Q08AG7 82 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF322Q6U7Q0 402 aaPredicted RBP14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 TREML4Q6UXN2 200 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 KLBQ86Z14 1044 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 SPERTQ8NA61 448 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 ZNF555Q8NEP9 628 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 OR51G2Q8NGK0 314 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 ITFG2Q969R8 447 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 SGK3Q96BR1 496 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 REEP6Q96HR9 211 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 MEGF10Q96KG7 1140 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 OR8B4Q96RC9 309 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 MRPL15Q9P015 296 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 MIOXQ9UGB7 285 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 LRP12Q9Y561 859 aa14.65□□□□□ -0.06
SHKBP1-203ENST00000594298 IGHV2-70DA0A0C4DH43 119 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 A0A1B0GWJ7 208 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 ANKRD30BLA7E2S9 258 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 OR2T7P0C7T2 308 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 RPS2P15880 293 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 CXCR4P61073 352 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 EGR3Q06889 387 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 RCN1Q15293 331 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 OCLNQ16625 522 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 ZNF829Q3KNS6 432 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 PRSS45Q7RTY3 260 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 FTMTQ8N4E7 242 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 CELF2-AS1Q8N7Q2 184 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 OR2T27Q8NH04 317 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 ZNF420Q8TAQ5 688 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 RAB40AQ8WXH6 277 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 Q96MT0 163 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 MBOAT4Q96T53 435 aa14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 SMPD3Q9NY59 655 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-203ENST00000594298 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 LOC100130705A0A1B0GUX0 176 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 TMEM269A0A1B0GVZ9 245 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 LRRC30A6NM36 301 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 E9PQ18 207 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 GNB2P62879 340 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 OR8G1Q15617 311 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 ZNF404Q494X3 552 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 PACRGLQ8N7B6 248 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 CSNK2A3Q8NEV1 391 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 OR10AD1Q8NGE0 317 aa14.63□□□□□ -0.07
SHKBP1-203ENST00000594298 ERGIC1Q969X5 290 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms