RNA–Protein interactions for RNA: ENST00000574997.1

TRIM25-209, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-209ENST00000574997 NDE1Q9NXR1 346 aa5.33□□□□□ -1.56
TRIM25-209ENST00000574997 ZNRD1Q9P1U0 126 aa5.33□□□□□ -1.56
TRIM25-209ENST00000574997 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 ZNF816-ZNF321PA0A0X1KG74 233 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 NKX6-3A6NJ46 265 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 ACOD1A6NK06 481 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 NPFFO15130 113 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 XPNPEP2O43895 674 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 CST4P01036 141 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 IFNGP01579 166 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 OPN1MWP04001 364 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SEMG1P04279 462 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 FABP3P05413 133 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 OPN1MW2P0DN77 364 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 OPN1MW3P0DN78 364 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 H2AFXP16104 143 aaPredicted RBP5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HSD11B1P28845 292 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 GABRA5P31644 462 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 FAM3AP98173 230 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SPIBQ01892 262 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SRSF4Q08170 494 aaKnown RBP5.32□□□□□ -1.56
TRIM25-209ENST00000574997 GK3PQ14409 553 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HERPUD1Q15011 391 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 TIGD6Q17RP2 521 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SNAI3Q3KNW1 292 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 LCN1P1Q5VSP4 162 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HIST2H2BDQ6DRA6 164 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 WDR82Q6UXN9 313 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 RASSF6Q6ZTQ3 369 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 KRT74Q7RTS7 529 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SLC16A9Q7RTY1 509 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 CALHM1Q8IU99 346 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.32□□□□□ -1.56
TRIM25-209ENST00000574997 C11orf53Q8IXP5 236 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 LNX2Q8N448 690 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 BEND2Q8NDZ0 799 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 C19orf18Q8NEA5 215 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SDR9C7Q8NEX9 313 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 OR56B2PQ8NGI1 322 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 ZNF671Q8TAW3 534 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 LRRC29Q8WV35 223 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SGK3Q96BR1 496 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HIST1H2AAQ96QV6 131 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 RTL8AQ9BWD3 113 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 MEGF9Q9H1U4 602 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 OR10A2Q9H208 303 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 RASSF4Q9H2L5 321 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 NIPAL2Q9H841 368 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HEXA-AS1Q9H8Q6 139 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 SMURF1Q9HCE7 757 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 CENPMQ9NSP4 180 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 RASL12Q9NYN1 266 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 HAO2Q9NYQ3 351 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 ADA2Q9NZK5 511 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 ONECUT1Q9UBC0 465 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 DNAJB11Q9UBS4 358 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 LRP12Q9Y561 859 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 MAB21L2Q9Y586 359 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 CDH10Q9Y6N8 788 aa5.32□□□□□ -1.56
TRIM25-209ENST00000574997 MEIOCA2RUB1 952 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 TBX1O43435 398 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 ANXA2P07355 339 aaKnown RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 ACAA1P09110 424 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 SPARCP09486 303 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 ATP6V1B1P15313 513 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 NCK1P16333 377 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 FAHP16930 419 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 HOXB6P17509 224 aaKnown RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 RBMXP38159 391 aaKnown RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 PRKXP51817 358 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 MNAT1P51948 309 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 KRTAP10-3P60369 221 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 HNRNPA0Q13151 305 aaKnown RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 HSP90B2PQ58FF3 399 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 WDR38Q5JTN6 314 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 SLC35F1Q5T1Q4 408 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 KPRPQ5T749 579 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 OTPQ5XKR4 325 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 STUMQ69YW2 141 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 SLC35E4Q6ICL7 350 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 CGB2Q6NT52 195 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 ZNF788Q6ZQV5 615 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 ZNF826PQ6ZT77 177 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 TIGD4Q8IY51 512 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 OR2T33Q8NG76 320 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 OR4C13Q8NGP0 309 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 OR2AE1Q8NHA4 323 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 OR2T6Q8NHC8 308 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 RNF133Q8WVZ7 376 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 CFHR4Q92496 578 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 TAF15Q92804 592 aaKnown RBP eCLIP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 REEP6Q96HR9 211 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 NSMCE2Q96MF7 247 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 RAB3IPQ96QF0 476 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 CCL13Q99616 98 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 NMNAT2Q9BZQ4 307 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 SLC25A10Q9UBX3 287 aaPredicted RBP5.31□□□□□ -1.56
TRIM25-209ENST00000574997 COMMD3-BMI1R4GMX3 469 aa5.31□□□□□ -1.56
TRIM25-209ENST00000574997 TET2Q6N021 2002 aaPredicted RBP5.3□□□□□ -1.56
TRIM25-209ENST00000574997 hCG_38984A0A1B0GV85 526 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms