RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SLC7A7Q9UM01 511 aa3.59□□□□□ -1.83
LINC00561-201ENST00000565815 MGAT4AQ9UM21 535 aa3.59□□□□□ -1.83
LINC00561-201ENST00000565815 PRELID1Q9Y255 219 aa3.59□□□□□ -1.83
LINC00561-201ENST00000565815 CLCA3PQ9Y6N3 262 aa3.59□□□□□ -1.83
LINC00561-201ENST00000565815 ANKRD12Q6UB98 2062 aa3.59□□□□□ -1.84
LINC00561-201ENST00000565815 MYO9AB2RTY4 2548 aa3.59□□□□□ -1.84
LINC00561-201ENST00000565815 ESPL1Q14674 2120 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 A0A0X1KG70 313 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ARGFXA6NJG6 315 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 IDSB3KWA1 339 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 C9J4A7 227 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PGRMC2O15173 223 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 FABP7O15540 132 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF432O94892 652 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PAHP00439 452 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PCCBP05166 539 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 GIPP09681 153 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PATE4P0C8F1 98 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OR12D1P0DN82 309 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ELK1P19419 428 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 CSNK2A2P19784 350 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 CELP19835 753 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 CALCRP30988 508 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 LCN1P31025 176 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ATP6V1E1P36543 226 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 FEN1P39748 380 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 GBX2P52951 348 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SMUG1Q53HV7 270 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OR2G6Q5TZ20 316 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SFXN4Q6P4A7 337 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZCCHC12Q6PEW1 402 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PAQR6Q6TCH4 344 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 RANBP3LQ86VV4 465 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ACBD4Q8NC06 268 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OR5K2Q8NHB8 316 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SPRYD4Q8WW59 207 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ITLN2Q8WWU7 325 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ARSGQ96EG1 525 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 NANSQ9NR45 359 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZCCHC3Q9NUD5 404 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ASF1BQ9NVP2 202 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SPATA2Q9UM82 520 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 DNAH14Q0VDD8 3507 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 RP1P56715 2156 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 TENM4Q6N022 2769 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 LINC00854A0A1B0GVQ3 168 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 C15orf62A8K5M9 175 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 K7EM74 188 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PRKNO60260 465 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 DNAJB6O75190 326 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PLGP00747 810 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 IFNGP01579 166 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 IL32P24001 234 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 CEACAM8P31997 349 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 EVI2BP34910 448 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 MPIP34949 423 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SSBP1Q04837 148 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 P2RY6Q15077 328 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 P2RY14Q15391 338 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 FCN2Q15485 313 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 MPPED2Q15777 294 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZIC1Q15915 447 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 AANATQ16613 207 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 GSG1Q2KHT4 349 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ODF4Q2M2E3 257 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 UBE2NLQ5JXB2 153 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 IDNKQ5T6J7 187 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OLFML2AQ68BL7 652 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 NIPAL3Q6P499 406 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 IGFL2Q6UWQ7 119 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 TMEM91Q6ZNR0 172 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 RTL4Q6ZR62 310 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SLC16A9Q7RTY1 509 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 NFE4Q86UQ8 179 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 COMMD7Q86VX2 200 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 EIF4E3Q8N5X7 224 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF611Q8N823 705 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 CLEC1AQ8NC01 280 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OR4D11Q8NGI4 311 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OR6T1Q8NGN1 323 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SMIM4Q8WVI0 70 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 TMEM203Q969S6 136 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 NUS1Q96E22 293 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OMA1Q96E52 524 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 RBM18Q96H35 190 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 PELOQ9BRX2 385 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF436Q9C0F3 470 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 OR52A5Q9H2C5 316 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 GLIPR2Q9H4G4 154 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 HEXA-AS1Q9H8Q6 139 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 MTHFD2LQ9H903 347 aaPredicted RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 FGF22Q9HCT0 170 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 CMC2Q9NRP2 79 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 TRPC4Q9UBN4 977 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 MYO15AQ9UKN7 3530 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ICE1Q9Y2F5 2266 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 ETV7Q9Y603 341 aa3.58□□□□□ -1.84
LINC00561-201ENST00000565815 DSPP15924 2871 aaKnown RBP3.58□□□□□ -1.84
LINC00561-201ENST00000565815 SHANK1Q9Y566 2161 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms