RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 SSMEM1Q8WWF3 244 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 ITPKCQ96DU7 683 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 AMELYQ99218 206 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 FEVQ99581 238 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 C1orf21Q9H246 121 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 ABCB9Q9NP78 766 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 ACOXLQ9NUZ1 547 aa13.82□□□□□ -0.2
CCNF-203ENST00000564236 RPUSD1Q9UJJ7 312 aaKnown RBP13.82□□□□□ -0.2
CCNF-203ENST00000564236 IGHV1-69DA0A0B4J2H0 117 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 hCG_1807616A0A1W2PRN6 198 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 FAM183AA6NL82 134 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 ANXA2P07355 339 aaKnown RBP13.81□□□□□ -0.2
CCNF-203ENST00000564236 T-ENOLP0DO92 83 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 IL5RAQ01344 420 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 CDONQ4KMG0 1287 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 RUSC1-AS1Q66K80 236 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 ERI1Q8IV48 349 aaKnown RBP13.81□□□□□ -0.2
CCNF-203ENST00000564236 FTMTQ8N4E7 242 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 ZNF454Q8N9F8 522 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 BOLLQ8N9W6 283 aaKnown RBP13.81□□□□□ -0.2
CCNF-203ENST00000564236 OR4F5Q8NH21 305 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 OTOSQ8NHW6 89 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 GIPC3Q8TF64 312 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 LRRC29Q8WV35 223 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 WFDC12Q8WWY7 111 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 ITFG2Q969R8 447 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 CHIAQ9BZP6 476 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 DNTTIP1Q9H147 329 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 OR10A2Q9H208 303 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 CNTD2Q9H8S5 307 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 C1RLQ9NZP8 487 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 ZNF391Q9UJN7 358 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 MPC1Q9Y5U8 109 aa13.81□□□□□ -0.2
CCNF-203ENST00000564236 DOCK11Q5JSL3 2073 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 PRODHO43272 600 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 TBX1O43435 398 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 CST4P01036 141 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 NAA10P41227 235 aaPredicted RBP13.8□□□□□ -0.2
CCNF-203ENST00000564236 TGM4P49221 684 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 RELBQ01201 579 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 WDR38Q5JTN6 314 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 TREML4Q6UXN2 200 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 FAM57BQ71RH2 274 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 SLC36A1Q7Z2H8 476 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 ADGRG5Q8IZF4 528 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 KIR3DL3Q8N743 410 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 OR10Z1Q8NGY1 313 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 C8orf46Q8TAG6 207 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 DYRK2Q92630 601 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 TAF15Q92804 592 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCNF-203ENST00000564236 CCT8L2Q96SF2 557 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 CHID1Q9BWS9 393 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 MED20Q9H944 212 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 BEX1Q9HBH7 125 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 RHBDD3Q9Y3P4 386 aa13.8□□□□□ -0.2
CCNF-203ENST00000564236 A0A1B0GVI7 797 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 TMEM210A6NLX4 147 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 AQP12BA6NM10 295 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 AMY2BP19961 511 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 PAICSP22234 425 aaKnown RBP13.79□□□□□ -0.2
CCNF-203ENST00000564236 RAG2P55895 527 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 CSNK2BP67870 215 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 CDK5Q00535 292 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 STUMQ69YW2 141 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 FIP1L1Q6UN15 594 aaKnown RBP13.79□□□□□ -0.2
CCNF-203ENST00000564236 AQP12AQ8IXF9 295 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 IQCF1Q8N6M8 205 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 NPRL2Q8WTW4 380 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 MICU1Q9BPX6 476 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 PPP1R3EQ9H7J1 279 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 NIPAL2Q9H841 368 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 TAS2R1Q9NYW7 299 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 N6AMT1Q9Y5N5 214 aa13.79□□□□□ -0.2
CCNF-203ENST00000564236 IGHV3OR15-7A0A075B7D8 119 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 A0A1B0GW55 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 H3BN98 237 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 FAM107AO95990 144 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 CST1P01037 141 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 LYNP07948 512 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 H2BFMP0C1H6 154 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L2P0CJ85 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L3P0CJ86 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L4P0CJ87 422 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L5P0CJ88 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L6P0CJ89 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L7P0CJ90 424 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 ACKR3P25106 362 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DCTDP32321 178 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 GNALP38405 381 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 PSMA6P60900 246 aaKnown RBP13.78□□□□□ -0.2
CCNF-203ENST00000564236 ARF6P62330 175 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 SLC35D3Q5M8T2 416 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 OLFML2AQ68BL7 652 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 DUX4L9Q6RFH8 374 aaPredicted RBP13.78□□□□□ -0.2
CCNF-203ENST00000564236 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 TBC1D15Q8TC07 691 aa13.78□□□□□ -0.2
CCNF-203ENST00000564236 OR5P3Q8WZ94 311 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms