RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CD300LGQ6UXG3 332 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 ANGPTL8Q6UXH0 198 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 OTUD6AQ7L8S5 288 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 MDP1Q86V88 176 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 KIF2BQ8N4N8 673 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 OR1L1Q8NH94 360 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 KCNS3Q9BQ31 491 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 NUDT9Q9BW91 350 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 OR2AG1Q9H205 316 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 ZC4H2Q9NQZ6 224 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 PSME2Q9UL46 239 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 SHANK1Q9Y566 2161 aa2.91□□□□□ -1.94
LINC00557-201ENST00000563184 IGHV1-3A0A0C4DH29 117 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 SLC22A20A6NK97 555 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 FARS2O95363 451 aaKnown RBP2.9□□□□□ -1.95
LINC00557-201ENST00000563184 OR1Q1Q15612 314 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 TSC22D1Q15714 1073 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 C5orf64Q2M2E5 130 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 TMEM236Q5W0B7 351 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 TRAM1L1Q8N609 369 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 DRAM1Q8N682 238 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 ASZ1Q8WWH4 475 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 RERGQ96A58 199 aaPredicted RBP2.9□□□□□ -1.95
LINC00557-201ENST00000563184 PLEKHF2Q9H8W4 249 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 FBXO8Q9NRD0 319 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 FARSAQ9Y285 508 aaKnown RBP2.9□□□□□ -1.95
LINC00557-201ENST00000563184 SCN4AP35499 1836 aa2.9□□□□□ -1.95
LINC00557-201ENST00000563184 A0A0B4J2E0 115 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 CHMP2AO43633 222 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 RALBP11234 206 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 OR1G1P47890 313 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 UBE2E1P51965 193 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 IFITM3Q01628 133 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 DMC1Q14565 340 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 C6orf99Q4VX62 202 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 OR2T5Q6IEZ7 315 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 TMPRSS11AQ6ZMR5 421 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 PROKR2Q8NFJ6 384 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 OR2T29Q8NH02 315 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 ENKURQ8TC29 256 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 CDS1Q92903 461 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 ISOC2Q96AB3 205 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 ISG20Q96AZ6 181 aaKnown RBP2.89□□□□□ -1.95
LINC00557-201ENST00000563184 UBE2E2Q96LR5 201 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 IP6K3Q96PC2 410 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.89□□□□□ -1.95
LINC00557-201ENST00000563184 NCOR1P1Q9H4R4 102 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 REEP1Q9H902 201 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 CRLF2Q9HC73 371 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 TREX1Q9NSU2 369 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 PEF1Q9UBV8 284 aaKnown RBP2.89□□□□□ -1.95
LINC00557-201ENST00000563184 SIGLEC7Q9Y286 467 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 LRRC42Q9Y546 428 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 TRIP11Q15643 1979 aa2.89□□□□□ -1.95
LINC00557-201ENST00000563184 IGHV3OR16-8A0A075B7F1 116 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 CCL15-CCL14A0A0B4J2E2 113 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 M0R1X1 148 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 POLR1CO15160 346 aaPredicted RBP2.88□□□□□ -1.95
LINC00557-201ENST00000563184 LHBP01229 141 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 GFAPP14136 432 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 DAOAP59103 153 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 ELF3P78545 371 aaPredicted RBP2.88□□□□□ -1.95
LINC00557-201ENST00000563184 FUT5Q11128 374 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 CCL15Q16663 113 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 KPRPQ5T749 579 aaPredicted RBP2.88□□□□□ -1.95
LINC00557-201ENST00000563184 MRPL21Q7Z2W9 205 aaKnown RBP2.88□□□□□ -1.95
LINC00557-201ENST00000563184 ERO1BQ86YB8 467 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 DCAKDQ8WVC6 231 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 RCN3Q96D15 328 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 WDR34Q96EX3 536 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 CERS2Q96G23 380 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 ZFP3Q96NJ6 502 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 CLSTN2Q9H4D0 955 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 DDX19BQ9UMR2 479 aa2.88□□□□□ -1.95
LINC00557-201ENST00000563184 BAZ2AQ9UIF9 1905 aaKnown RBP2.87□□□□□ -1.95
LINC00557-201ENST00000563184 ARPC4-TTLL3A0A0A6YYG9 625 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 LINC01619G3V211 115 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 H3BN98 237 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 RNASE2P10153 161 aaKnown RBP2.87□□□□□ -1.95
LINC00557-201ENST00000563184 NTF3P20783 257 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 PSMB5P28074 263 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 KDSRQ06136 332 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 NAB1Q13506 487 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 KLHL40Q2TBA0 621 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 EMC6Q9BV81 110 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 BLZF1Q9H2G9 400 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 OR51B2Q9Y5P1 312 aa2.87□□□□□ -1.95
LINC00557-201ENST00000563184 TICRRQ7Z2Z1 1910 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 LOXHD1Q8IVV2 1947 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 SEC16AO15027 2179 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 C16orf90A8MZG2 172 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 MANBAO00462 879 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 PSPHP1O15172 72 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 HSBP1O75506 76 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 GATBO75879 557 aaKnown RBP2.86□□□□□ -1.95
LINC00557-201ENST00000563184 RPN2P04844 631 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 PRKACBP22694 351 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 CXCR1P25024 350 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 GABRR2P28476 465 aa2.86□□□□□ -1.95
LINC00557-201ENST00000563184 PCK1P35558 622 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms