RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SDCBPO00560 298 aaPredicted RBP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 CST4P01036 141 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 RCC1P18754 421 aaPredicted RBP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 FBLP22087 321 aaKnown RBP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 PAX6P26367 422 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 F2RL1P55085 397 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 CSNK2A1P68400 391 aaPredicted RBP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 RBM39Q14498 530 aaKnown RBP15.51■□□□□ 0.07
SYNE3-202ENST00000553340 FOXRED2Q8IWF2 684 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 CSNK2A3Q8NEV1 391 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 ZDHHC12Q96GR4 267 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 ZNF304Q9HCX3 659 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 GPR84Q9NQS5 396 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 PARP11Q9NR21 331 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 B3GALT5Q9Y2C3 310 aa15.51■□□□□ 0.07
SYNE3-202ENST00000553340 H3BMH7 237 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 HKR1P10072 659 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 RPS2P15880 293 aaKnown RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 DHPSP49366 369 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 DVL1P1P54792 670 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 GKN2Q86XP6 184 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 C15orf54Q8N8G6 183 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 LMX1AQ8TE12 382 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 RHBDD1Q8TEB9 315 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 EMG1Q92979 244 aaKnown RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 NUDT22Q9BRQ3 303 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 OR10A2Q9H208 303 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 SERINC1Q9NRX5 453 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 EHFQ9NZC4 300 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 KLHL13Q9P2N7 655 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 ASH2LQ9UBL3 628 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 PISDQ9UG56 409 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 VDAC3Q9Y277 283 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 LHFPL6Q9Y693 200 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 GON4LQ3T8J9 2241 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 A0A1W2PPC4 97 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 SLC2A1P11166 492 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 SNU13P55769 128 aaKnown RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 C17orf67Q0P5P2 114 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 HABP2Q14520 560 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 THEM4Q5T1C6 240 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 OR8B12Q8NGG6 310 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 ZNF775Q96BV0 537 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 KIRREL1Q96J84 757 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 FAM71F1Q96KD3 344 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 OR5B2Q96R09 309 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 SOX7Q9BT81 388 aa15.5■□□□□ 0.07
SYNE3-202ENST00000553340 RPH3AQ9Y2J0 694 aaPredicted RBP15.5■□□□□ 0.07
SYNE3-202ENST00000553340 PTAFRP25105 342 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 ARL4DP49703 201 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 SNRPEP62304 92 aaKnown RBP15.49■□□□□ 0.07
SYNE3-202ENST00000553340 NSUN5P2Q63ZY6 315 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 DHRS11Q6UWP2 260 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 TMPRSS9Q7Z410 1059 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 VN1R1Q9GZP7 353 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 FANCFQ9NPI8 374 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 ALKBH4Q9NXW9 302 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 PCDH15Q96QU1 1955 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 LIPT2A6NK58 231 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 VSTM2BA6NLU5 285 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 C1orf196B1AJZ1 125 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 H3BML4 177 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 RPL12P30050 165 aaKnown RBP15.49■□□□□ 0.07
SYNE3-202ENST00000553340 ZNF121P58317 390 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-202ENST00000553340 HYAL1Q12794 435 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 SURF2Q15527 256 aaPredicted RBP15.49■□□□□ 0.07
SYNE3-202ENST00000553340 TMEM268Q5VZI3 342 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 OR51T1Q8NGJ9 327 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 C14orf79Q96F83 325 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 CYYR1Q96J86 154 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 MRPL13Q9BYD1 178 aaKnown RBP15.49■□□□□ 0.07
SYNE3-202ENST00000553340 CNTNAP3Q9BZ76 1288 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 EDARQ9UNE0 448 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 C14orf166Q9Y224 244 aaKnown RBP15.49■□□□□ 0.07
SYNE3-202ENST00000553340 KPTNQ9Y664 436 aa15.49■□□□□ 0.07
SYNE3-202ENST00000553340 C9JQL5 133 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 K7EPK0 472 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 JTBO76095 146 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 KNG1P01042 644 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 ACAA1P09110 424 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-202ENST00000553340 CLRN1P58418 232 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 AKIRIN2Q53H80 203 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 Q6ZRG5 221 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 FAM71E2Q8N5Q1 922 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 EGLN1Q9GZT9 426 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 C1orf123Q9NWV4 160 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 PMS2P1A4D2B8 440 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 ZNF708P17019 499 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 RBMXP38159 391 aaKnown RBP15.48■□□□□ 0.07
SYNE3-202ENST00000553340 ECH1Q13011 328 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 SMCO1Q147U7 214 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 HMGN3Q15651 99 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 TSC22D1Q15714 1073 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 IAH1Q2TAA2 248 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-202ENST00000553340 C16orf47Q6ZP98 133 aaPredicted RBP15.48■□□□□ 0.07
SYNE3-202ENST00000553340 FAM89BQ8N5H3 189 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 PNLDC1Q8NA58 520 aaKnown RBP15.48■□□□□ 0.07
SYNE3-202ENST00000553340 AKR1E2Q96JD6 320 aa15.48■□□□□ 0.07
SYNE3-202ENST00000553340 A0A1W2PNV4 684 aa15.47■□□□□ 0.07
SYNE3-202ENST00000553340 FAM157AC9JC47 383 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms