RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 NEU1Q99519 415 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SLC6A7Q99884 636 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ALG12Q9BV10 488 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 HRH4Q9H3N8 390 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 KCNK15Q9H427 330 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 RNF122Q9H9V4 155 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF160Q9HCG1 818 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZDHHC8Q9ULC8 765 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SCN3AQ9NY46 2000 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 LOC100289279A0A1B0GTE1 492 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 FAM230AA0A1W2PPH8 454 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TLCD2A6NGC4 264 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 DBX1A6NMT0 343 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 EREGO14944 169 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 P2RX6O15547 441 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 UPK3AO75631 287 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 CSRP1P21291 193 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 CSNK1A1P48729 337 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 LSM6P62312 80 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 TRA2AQ13595 282 aaKnown RBP eCLIP4.68□□□□□ -1.66
PROM1-220ENST00000540805 TRMT12Q53H54 448 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF684Q5T5D7 378 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SLC16A9Q7RTY1 509 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 LYG2Q86SG7 212 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 BAP18Q8IXM2 172 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 UBALD2Q8IYN6 164 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF511Q8NB15 262 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 MFSD9Q8NBP5 474 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 BHLHE23Q8NDY6 225 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 OR1N1Q8NGS0 311 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 STT3BQ8TCJ2 826 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 DTD1Q8TEA8 209 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 HIST1H2BAQ96A08 127 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 FAM3DQ96BQ1 224 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 FOXRED1Q96CU9 486 aaPredicted RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 FER1L6-AS2Q96M78 137 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 NRIP2Q9BQI9 281 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF426Q9BUY5 554 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF700Q9H0M5 742 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ACKR4Q9NPB9 350 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SLC17A5Q9NRA2 495 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SMCO4Q9NRQ5 59 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 UBQLN4Q9NRR5 601 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 DUSP22Q9NRW4 184 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 FRRS1LQ9P0K9 344 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 OR14J1Q9UGF5 321 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 MRM2Q9UI43 246 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 BOKQ9UMX3 212 aaPredicted RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 DHDHQ9UQ10 334 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 MMACHCQ9Y4U1 282 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TDRD6O60522 2096 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GV50 99 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 A0A1W2PPC4 97 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TMEM212A6NML5 194 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF850A8MQ14 1090 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 RAD51DO75771 328 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 DDAH2O95865 285 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 PNMTP11086 282 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 CYB561P49447 251 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 EFNA3P52797 238 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 RRADP55042 308 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TAS2R60P59551 318 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SNRPNP63162 240 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 OR8G1Q15617 311 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 NKPD1Q17RQ9 610 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 C2orf76Q3KRA6 126 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 SLC35D2Q76EJ3 337 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TIPARPQ7Z3E1 657 aaKnown RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 ZNF595Q8IYB9 648 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 BATF2Q8N1L9 274 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 C15orf54Q8N8G6 183 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TMED6Q8WW62 240 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 IL1F10Q8WWZ1 152 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 DCUN1D4Q92564 292 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 THRSPQ92748 146 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 RNF166Q96A37 237 aaPredicted RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 DDIT4LQ96D03 193 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 PHB2Q99623 299 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 NMNAT2Q9BZQ4 307 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 OBP2BQ9NPH6 170 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 TMEM100Q9NV29 134 aa4.68□□□□□ -1.66
PROM1-220ENST00000540805 C19orf53Q9UNZ5 99 aaPredicted RBP4.68□□□□□ -1.66
PROM1-220ENST00000540805 A0A087X0M5 115 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GTH9 108 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 A0A1B0GX30 115 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 A0A1W2PQF6 199 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 PATE3B3GLJ2 98 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 ZNF736B4DX44 427 aaPredicted RBP4.67□□□□□ -1.66
PROM1-220ENST00000540805 F8VVB4 439 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 F8VWA3 439 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 IFNL4K9M1U5 179 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 ARPC3O15145 178 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 MBTPS2O43462 519 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 DNAJB6O75190 326 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 MPIG6BO95866 241 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 CD74P04233 296 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 SFTPBP07988 381 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 SNRNP70P08621 437 aaKnown RBP4.67□□□□□ -1.66
PROM1-220ENST00000540805 NPSP0C0P6 89 aa4.67□□□□□ -1.66
PROM1-220ENST00000540805 EIF2S3P41091 472 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms