RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 AP4S1Q9Y587 144 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 MEGF8Q7Z7M0 2845 aa10.47□□□□□ -0.73
HSPG2-212ENST00000493940 MDFIC2A0A1B0GVS7 189 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 ZNF850A8MQ14 1090 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 G3V2T6 193 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 SRSF10O75494 262 aaKnown RBP10.46□□□□□ -0.73
HSPG2-212ENST00000493940 SFTPBP07988 381 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 IRF2P14316 349 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 HOXB6P17509 224 aaKnown RBP10.46□□□□□ -0.73
HSPG2-212ENST00000493940 DDOSTP39656 456 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 SLX4IPQ5VYV7 408 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 PLEKHG7Q6ZR37 379 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 ASRGL1Q7L266 308 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 SSX6Q7RTT6 188 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 TCEANCQ8N8B7 351 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 PLPP7Q8NBV4 271 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 OR8B3Q8NGG8 313 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 HPSE2Q8WWQ2 592 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 RPL3LQ92901 407 aaKnown RBP10.46□□□□□ -0.73
HSPG2-212ENST00000493940 UBE2FQ969M7 185 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 UPRTQ96BW1 309 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 OR8B2Q96RD0 313 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 CIB1Q99828 191 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 APOL4Q9BPW4 351 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 OR10A2Q9H208 303 aa10.46□□□□□ -0.73
HSPG2-212ENST00000493940 OOEPA6NGQ2 149 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 A6NLC8 198 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 ANKRD30BLA7E2S9 258 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 CDIPTO14735 213 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 ADAM20O43506 726 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 WIPF1O43516 503 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 PLATP00750 562 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 IGLV3-1P01715 115 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 SELLP14151 372 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 PSMA6P60900 246 aaKnown RBP10.45□□□□□ -0.74
HSPG2-212ENST00000493940 FGF12P61328 243 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 ESRRGP62508 458 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 UBA52P62987 128 aaKnown RBP10.45□□□□□ -0.74
HSPG2-212ENST00000493940 MFGE8Q08431 387 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-212ENST00000493940 PRDX4Q13162 271 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 ARMCX4Q5H9R4 360 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 C1orf146Q5VVC0 180 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 TEX36Q5VZQ5 186 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 BRD3OSQ6XYD6 125 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 MEPCEQ7L2J0 689 aaKnown RBP10.45□□□□□ -0.74
HSPG2-212ENST00000493940 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-212ENST00000493940 BPIFB2Q8N4F0 458 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 OR5T2Q8NGG2 359 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 OR52H1Q8NGJ2 320 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 FAM216AQ8WUB2 273 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 LRRC29Q8WV35 223 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 OR5P3Q8WZ94 311 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 PIGCQ92535 297 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 PLEKHA8Q96JA3 519 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 IL4I1Q96RQ9 567 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 YIPF3Q9GZM5 350 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 GABARAPL1Q9H0R8 117 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 TLNRD1Q9H1K6 362 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 WDR13Q9H1Z4 485 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 OPA3Q9H6K4 179 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 ADGRL4Q9HBW9 690 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 KRT84Q9NSB2 600 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 KIF17Q9P2E2 1029 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 CLN8Q9UBY8 286 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 OR5V1Q9UGF6 321 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 LAMP5Q9UJQ1 280 aa10.45□□□□□ -0.74
HSPG2-212ENST00000493940 hCG_1807616A0A1W2PRN6 198 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 TMEM89A2RUT3 159 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 APOL3O95236 402 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 MMP9P14780 707 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 FASP25445 335 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 DCTDP32321 178 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 DLX1P56177 255 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 GMFBP60983 142 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 ROM1Q03395 351 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 FAM76BQ5HYJ3 339 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 WDR38Q5JTN6 314 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 KRT74Q7RTS7 529 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 KRT77Q7Z794 578 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 GALNT4Q8N4A0 578 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 SPERTQ8NA61 448 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 SCCPDHQ8NBX0 429 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 OR8S1Q8NH09 359 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 PYDC1Q8WXC3 89 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 DNAJC9Q8WXX5 260 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 OR8B4Q96RC9 309 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 TBX15Q96SF7 602 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 CCL13Q99616 98 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 PKP2Q99959 881 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 MRI1Q9BV20 369 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 PAPOLGQ9BWT3 736 aaKnown RBP10.44□□□□□ -0.74
HSPG2-212ENST00000493940 SUCNR1Q9BXA5 334 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 MMADHCQ9H3L0 296 aaPredicted RBP10.44□□□□□ -0.74
HSPG2-212ENST00000493940 SNTG1Q9NSN8 517 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 C14orf119Q9NWQ9 140 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 OAZ3Q9UMX2 235 aa10.44□□□□□ -0.74
HSPG2-212ENST00000493940 TRAV38-1A0A0B4J264 116 aa10.43□□□□□ -0.74
HSPG2-212ENST00000493940 TRAV40A0A0B4J280 105 aa10.43□□□□□ -0.74
HSPG2-212ENST00000493940 TMEM269A0A1B0GVZ9 245 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms